RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ABHD14AQ9BUJ0 271 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 IFI27L2Q9H2X8 130 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 AURKAIP1Q9NWT8 199 aaPredicted RBP13.7□□□□□ -0.22
SMG6-214ENST00000573827 TRBV6-6A0A0A6YYG2 114 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 LDLRAD4O15165 306 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 SOCS1O15524 211 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 TMEM50BP56557 158 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 P2RY14Q15391 338 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 SSX1Q16384 188 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 IZUMO2Q6UXV1 221 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 ZNF833PQ6ZTB9 187 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 REC114Q7Z4M0 266 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 MRPL41Q8IXM3 137 aaKnown RBP13.69□□□□□ -0.22
SMG6-214ENST00000573827 RNF152Q8N8N0 203 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 MGLLQ99685 303 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 NABP2Q9BQ15 211 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 MRPL20Q9BYC9 149 aaKnown RBP13.69□□□□□ -0.22
SMG6-214ENST00000573827 PARP12Q9H0J9 701 aaKnown RBP13.69□□□□□ -0.22
SMG6-214ENST00000573827 KCNIP1Q9NZI2 227 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 AK6Q9Y3D8 172 aaKnown RBP13.69□□□□□ -0.22
SMG6-214ENST00000573827 TENM3Q9P273 2699 aa13.69□□□□□ -0.22
SMG6-214ENST00000573827 SHISA3A0PJX4 238 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 NCBP2LA6PVI3 153 aaKnown RBP13.68□□□□□ -0.22
SMG6-214ENST00000573827 AP4M1O00189 453 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 HSMCR30P0CW71 290 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 CD33P20138 364 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 PSMA1P25786 263 aaKnown RBP13.68□□□□□ -0.22
SMG6-214ENST00000573827 BLVRBP30043 206 aaPredicted RBP13.68□□□□□ -0.22
SMG6-214ENST00000573827 OR3A3P47888 321 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 THBS3P49746 956 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 TRAM1Q15629 374 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 TBCEQ15813 527 aaPredicted RBP13.68□□□□□ -0.22
SMG6-214ENST00000573827 P2RX4Q99571 388 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 HDHD3Q9BSH5 251 aaPredicted RBP13.68□□□□□ -0.22
SMG6-214ENST00000573827 ZNF580Q9UK33 172 aa13.68□□□□□ -0.22
SMG6-214ENST00000573827 SAA2-SAA4A0A096LPE2 208 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 SAA2P0DJI9 122 aaPredicted RBP13.67□□□□□ -0.22
SMG6-214ENST00000573827 KRTAP10-11P60412 298 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 PLA2G7Q13093 441 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 KHDC1LQ5JSQ8 128 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 FOXRED2Q8IWF2 684 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 COMMD1Q8N668 190 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 GALMQ96C23 342 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 AGMATQ9BSE5 352 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 ZFP57Q9NU63 452 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 AK3Q9UIJ7 227 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 HSF4Q9ULV5 492 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 LRRC42Q9Y546 428 aa13.67□□□□□ -0.22
SMG6-214ENST00000573827 PF4P02776 101 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 IGF1P05019 195 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 ARSBP15848 533 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 CLDN12P56749 244 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 EGFEM1PQ0D2K5 195 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 CD200R1LQ6Q8B3 271 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 LCNL1Q6ZST4 164 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 C8orf86Q6ZUL3 223 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 RCC1LQ96I51 464 aaKnown RBP13.66□□□□□ -0.22
SMG6-214ENST00000573827 CCDC90BQ9GZT6 254 aa13.66□□□□□ -0.22
SMG6-214ENST00000573827 KMT2CQ8NEZ4 4911 aaKnown RBP13.65□□□□□ -0.22
SMG6-214ENST00000573827 PROP1O75360 226 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 ARL6IP5O75915 188 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 RPLP1P05386 114 aaKnown RBP13.65□□□□□ -0.22
SMG6-214ENST00000573827 CNTFRP26992 372 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 CALRP27797 417 aaKnown RBP13.65□□□□□ -0.22
SMG6-214ENST00000573827 SLC6A1P30531 599 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 RAB11BQ15907 218 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 PNLIPRP3Q17RR3 467 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 MOB1BQ7L9L4 216 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 OR51D1Q8NGF3 324 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 MYOZ3Q8TDC0 251 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 FAM3DQ96BQ1 224 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 CNBD2Q96M20 576 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 ACOT13Q9NPJ3 140 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 PLEKHJ1Q9NW61 149 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 ZNF107Q9UII5 783 aaPredicted RBP13.65□□□□□ -0.22
SMG6-214ENST00000573827 STAB2Q8WWQ8 2551 aa13.65□□□□□ -0.22
SMG6-214ENST00000573827 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 K7EIL1 84 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 ITGB1BP1O14713 200 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 ST8SIA5O15466 376 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 RGS11O94810 467 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 IGHG4P01861 327 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 SOX6P35712 828 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 HSPA13P48723 471 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 ACTBP60709 375 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 SLC35B1P78383 322 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 FOXE3Q13461 319 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 KIAA0141Q14154 515 aaPredicted RBP13.64□□□□□ -0.23
SMG6-214ENST00000573827 C2orf76Q3KRA6 126 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 FAM71F2Q6NXP2 309 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 TEX38Q6PEX7 206 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 ZNF367Q7RTV3 350 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 NPBQ8NG41 125 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 OR2AK2Q8NG84 335 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 RAX2Q96IS3 184 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 ARHGAP5-AS1Q96IT6 56 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 RASL11BQ9BPW5 248 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 VCX3BQ9H321 246 aa13.64□□□□□ -0.23
SMG6-214ENST00000573827 RIMS4Q9H426 269 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms