RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 A0A1W2PRX2 142 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 PRB2P02812 416 aaPredicted RBP13.66□□□□□ -0.22
SMG6-212ENST00000573153 P2RY14Q15391 338 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 CENPVQ7Z7K6 275 aaPredicted RBP13.66□□□□□ -0.22
SMG6-212ENST00000573153 MOB3BQ86TA1 216 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 TGIF2LXQ8IUE1 241 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 PRR18Q8N4B5 295 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 OR4F17Q8NGA8 305 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 OR8H1Q8NGG4 311 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 OR10V1Q8NGI7 309 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 FAM3DQ96BQ1 224 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 GALMQ96C23 342 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 OR4F4Q96R69 305 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 PLEKHJ1Q9NW61 149 aa13.66□□□□□ -0.22
SMG6-212ENST00000573153 SOCS1O15524 211 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 RGS11O94810 467 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 MOSP00540 346 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 TMEM50BP56557 158 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 HNF4GQ14541 408 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 C18orf65Q6ZTR6 163 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 OR51D1Q8NGF3 324 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 OR52L2PQ8NGH6 319 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 ABHD14AQ9BUJ0 271 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 STEAP1Q9UHE8 339 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 MGAT4AQ9UM21 535 aa13.65□□□□□ -0.22
SMG6-212ENST00000573153 TSSC4Q9Y5U2 329 aaPredicted RBP13.65□□□□□ -0.22
SMG6-212ENST00000573153 SHISA3A0PJX4 238 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 ITGB1BP1O14713 200 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 PDCD5O14737 125 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 PPP1CCP36873 323 aaKnown RBP13.64□□□□□ -0.23
SMG6-212ENST00000573153 C2orf76Q3KRA6 126 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 SPARTQ8N0X7 666 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 FAM71E2Q8N5Q1 922 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 OR4X2Q8NGF9 303 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 OR56B1Q8NGI3 324 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 FCGR1BQ92637 280 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 PHF21AQ96BD5 680 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 LIN7CQ9NUP9 197 aaKnown RBP13.64□□□□□ -0.23
SMG6-212ENST00000573153 ABRACLQ9P1F3 81 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 LINC00527Q9UJ94 153 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 DNAH9Q9NYC9 4486 aa13.64□□□□□ -0.23
SMG6-212ENST00000573153 TCRBV4S1A1TA0A5B7 111 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 FGF9P31371 208 aaPredicted RBP13.63□□□□□ -0.23
SMG6-212ENST00000573153 CFHR3Q02985 330 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 LSAMPQ13449 338 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 C9orf152Q5JTZ5 239 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 FAM71F2Q6NXP2 309 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 ZNF833PQ6ZTB9 187 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 CHPT1Q8WUD6 406 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 ABCG5Q9H222 651 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 AK3Q9UIJ7 227 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 RAB22AQ9UL26 194 aa13.63□□□□□ -0.23
SMG6-212ENST00000573153 TMEM272A0A1B0GTI8 110 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 PSMB11A5LHX3 300 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 IFITM5A6NNB3 132 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 IGLL1P15814 213 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 GPR12P47775 334 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 CLDN12P56749 244 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 STPG2Q8N412 459 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 LINC00482Q8N8I6 264 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 HSPB9Q9BQS6 159 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 ZNF251Q9BRH9 671 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 PECRQ9BY49 303 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 PARP12Q9H0J9 701 aaKnown RBP13.62□□□□□ -0.23
SMG6-212ENST00000573153 IFI27L2Q9H2X8 130 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 C12orf4Q9NQ89 552 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 ZNF580Q9UK33 172 aa13.62□□□□□ -0.23
SMG6-212ENST00000573153 MYL9P24844 172 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 VEGFCP49767 419 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 F2RL1P55085 397 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 PLA2G7Q13093 441 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 PLAC9Q5JTB6 97 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 HES5Q5TA89 166 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 SLC35E3Q7Z769 313 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 COMMD1Q8N668 190 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 OR2AK2Q8NG84 335 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 PTX4Q96A99 478 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 ARHGAP5-AS1Q96IT6 56 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 RITA1Q96K30 269 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 S1PR3Q99500 378 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 HDHD3Q9BSH5 251 aaPredicted RBP13.61□□□□□ -0.23
SMG6-212ENST00000573153 GHITMQ9H3K2 345 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 CHMP1AQ9HD42 196 aaPredicted RBP13.61□□□□□ -0.23
SMG6-212ENST00000573153 Q9N2K0 584 aa13.61□□□□□ -0.23
SMG6-212ENST00000573153 AURKAIP1Q9NWT8 199 aaPredicted RBP13.61□□□□□ -0.23
SMG6-212ENST00000573153 RAB3BP20337 219 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 RAB6AP20340 208 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 OR10A3P58181 314 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 RPL23AP62750 156 aaKnown RBP13.6□□□□□ -0.23
SMG6-212ENST00000573153 HLA-DRB3P79483 266 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 FOXB2Q5VYV0 432 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 ZNF773Q6PK81 442 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 FOXRED2Q8IWF2 684 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 AGMATQ9BSE5 352 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 SLC23A1Q9UHI7 598 aa13.6□□□□□ -0.23
SMG6-212ENST00000573153 SAA2-SAA4A0A096LPE2 208 aa13.59□□□□□ -0.23
SMG6-212ENST00000573153 NCBP2LA6PVI3 153 aaKnown RBP13.59□□□□□ -0.23
SMG6-212ENST00000573153 SERPINE3A8MV23 424 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms