RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 RAB11BQ15907 218 aa10.38□□□□□ -0.75
SPG7-221ENST00000569720 SFXN4Q6P4A7 337 aa10.38□□□□□ -0.75
SPG7-221ENST00000569720 MOB3BQ86TA1 216 aa10.38□□□□□ -0.75
SPG7-221ENST00000569720 LINC00596Q86U02 117 aa10.38□□□□□ -0.75
SPG7-221ENST00000569720 NAA50Q9GZZ1 169 aaKnown RBP10.38□□□□□ -0.75
SPG7-221ENST00000569720 IFT22Q9H7X7 185 aa10.38□□□□□ -0.75
SPG7-221ENST00000569720 RABL2AQ9UBK7 228 aaPredicted RBP10.38□□□□□ -0.75
SPG7-221ENST00000569720 RABL2BQ9UNT1 228 aa10.38□□□□□ -0.75
SPG7-221ENST00000569720 AK6Q9Y3D8 172 aaKnown RBP10.38□□□□□ -0.75
SPG7-221ENST00000569720 DNAH9Q9NYC9 4486 aa10.38□□□□□ -0.75
SPG7-221ENST00000569720 A0A075B6Q4 140 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 A0A1W2PPE3 182 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 FAM90A10PA6NDY2 464 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 FAM90A7PA6NKC0 464 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 NCBP2LA6PVI3 153 aaKnown RBP10.37□□□□□ -0.75
SPG7-221ENST00000569720 FAM90A23PA8MXZ1 464 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 ARSBP15848 533 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 RAB6AP20340 208 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 RBM11P57052 281 aaKnown RBP10.37□□□□□ -0.75
SPG7-221ENST00000569720 CD69Q07108 199 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 ARL6IP1Q15041 203 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 NHLRC3Q5JS37 347 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 ETV3LQ6ZN32 361 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 C8orf86Q6ZUL3 223 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 STPG2Q8N412 459 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 KLHL30-AS1Q8NEE0 82 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 OR52M1Q8NGK5 317 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 DYNC2LI1Q8TCX1 351 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 NEK7Q8TDX7 302 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 GON7Q9BXV9 100 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 RAB9BQ9NP90 201 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 LINC00527Q9UJ94 153 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 RAB22AQ9UL26 194 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 SPATA2Q9UM82 520 aa10.37□□□□□ -0.75
SPG7-221ENST00000569720 MRPS28Q9Y2Q9 187 aaKnown RBP10.37□□□□□ -0.75
SPG7-221ENST00000569720 A0A0A6YYH2 397 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 TRAV39A0A0B4J263 110 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 IGHV1-3A0A0C4DH29 117 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 SHISA3A0PJX4 238 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 METTL21EPA6NDL7 271 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 A6NJ64 397 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 AP4M1O00189 453 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 SDCBPO00560 298 aaPredicted RBP10.36□□□□□ -0.75
SPG7-221ENST00000569720 GTF2F2P13984 249 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 EBI3Q14213 229 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 MPV17LQ2QL34 196 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 ATAD3CQ5T2N8 411 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 AWAT2Q6E213 333 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 TEX38Q6PEX7 206 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 TGIF2LXQ8IUE1 241 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 ZNF695Q8IW36 515 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 IZUMO1Q8IYV9 350 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 LINC00311Q8N616 119 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 OR2T10Q8NGZ9 312 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 ARL11Q969Q4 196 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 FAM3DQ96BQ1 224 aa10.36□□□□□ -0.75
SPG7-221ENST00000569720 EAF1Q96JC9 268 aaPredicted RBP10.36□□□□□ -0.75
SPG7-221ENST00000569720 URM1Q9BTM9 101 aaKnown RBP10.36□□□□□ -0.75
SPG7-221ENST00000569720 NBEAL2Q6ZNJ1 2754 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
SPG7-221ENST00000569720 ORC5O43913 435 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 GLAP06280 429 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 SERPINA2P20848 420 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 REG1BP48304 166 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 MXD1Q05195 221 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 SPCS2Q15005 226 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 PNLIPRP3Q17RR3 467 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 RAB12Q6IQ22 244 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 GLIPR1L1Q6UWM5 242 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 C8orf31Q8N9H6 132 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 C15orf40Q8WUR7 153 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 CCDC107Q8WV48 283 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 ORAI1Q96D31 301 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 P2RX4Q99571 388 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 B9D2Q9BPU9 175 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 NXF2Q9GZY0 626 aaKnown RBP10.35□□□□□ -0.75
SPG7-221ENST00000569720 RNF167Q9H6Y7 350 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 SPACA1Q9HBV2 294 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 LIN7CQ9NUP9 197 aaKnown RBP10.35□□□□□ -0.75
SPG7-221ENST00000569720 GFOD1Q9NXC2 390 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 DAPK2Q9UIK4 370 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 ADAM30Q9UKF2 790 aa10.35□□□□□ -0.75
SPG7-221ENST00000569720 IGHV3-72A0A0B4J1Y9 119 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 TMEM14DPA8MWL7 114 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 TXNL1O43396 289 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 CD1BP29016 333 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 GPR12P47775 334 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 RAB25P57735 213 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 DGCR2P98153 550 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 C2orf76Q3KRA6 126 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 Q3ZCU0 254 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 SLC22A6Q4U2R8 563 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 CXorf66Q5JRM2 361 aaPredicted RBP10.34□□□□□ -0.75
SPG7-221ENST00000569720 IDNKQ5T6J7 187 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 C11orf87Q6NUJ2 197 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 C18orf65Q6ZTR6 163 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 GFI1Q99684 422 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 RASL11BQ9BPW5 248 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 ABCG5Q9H222 651 aa10.34□□□□□ -0.75
SPG7-221ENST00000569720 TENM3Q9P273 2699 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms