RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 RAB22AQ9UL26 194 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 V9GY05 133 aa8.86□□□□□ -0.99
CDH3-206ENST00000567674 FOXI3A8MTJ6 420 aaPredicted RBP8.85□□□□□ -0.99
CDH3-206ENST00000567674 SERPINE3A8MV23 424 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 DENRO43583 198 aaKnown RBP8.85□□□□□ -0.99
CDH3-206ENST00000567674 RBBP9O75884 186 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 PF4V1P10720 104 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 RAB6AP20340 208 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 ZBTB25P24278 435 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 FGF9P31371 208 aaPredicted RBP8.85□□□□□ -0.99
CDH3-206ENST00000567674 TAGLNQ01995 201 aaKnown RBP8.85□□□□□ -0.99
CDH3-206ENST00000567674 UNC119Q13432 240 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 FOXE3Q13461 319 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 RAB11BQ15907 218 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 TCTEX1D4Q5JR98 221 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 UTF1Q5T230 341 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 IZUMO2Q6UXV1 221 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 ZNF833PQ6ZTB9 187 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 STPG2Q8N412 459 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 C11orf44Q8N8P7 122 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 Q8N9W7 124 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 OR2AK2Q8NG84 335 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 PHF21AQ96BD5 680 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 SULT4A1Q9BR01 284 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 LPAR5Q9H1C0 372 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 NDUFB11Q9NX14 153 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 GAB2Q9UQC2 676 aa8.85□□□□□ -0.99
CDH3-206ENST00000567674 TRAV39A0A0B4J263 110 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 TRDV1A0A1B0GX56 115 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 UBE2QL1A1L167 161 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 OR5H14A6NHG9 310 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 NCBP2LA6PVI3 153 aaKnown RBP8.84□□□□□ -0.99
CDH3-206ENST00000567674 ANKRD65E5RJM6 399 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 LDLRAD4O15165 306 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 SCGNO76038 276 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 HSMCR30P0CW71 290 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 CD33P20138 364 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 CALRP27797 417 aaKnown RBP8.84□□□□□ -0.99
CDH3-206ENST00000567674 SOX6P35712 828 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 MYCNOSP40205 109 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 GPR12P47775 334 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 CDX1P47902 265 aaPredicted RBP8.84□□□□□ -0.99
CDH3-206ENST00000567674 LSAMPQ13449 338 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 DCTN2Q13561 401 aaKnown RBP8.84□□□□□ -0.99
CDH3-206ENST00000567674 DIAPH2-AS1Q14236 149 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 SSX1Q16384 188 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 FAM27D1Q5T7N8 215 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 LYG1Q8N1E2 194 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 TCTEX1D1Q8N7M0 179 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.84□□□□□ -0.99
CDH3-206ENST00000567674 NPBQ8NG41 125 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 OR1L1Q8NH94 360 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 FAM46BQ96A09 425 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 FAM3DQ96BQ1 224 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 FAAP24Q9BTP7 215 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 CCDC90BQ9GZT6 254 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 C12orf4Q9NQ89 552 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 SLC23A1Q9UHI7 598 aa8.84□□□□□ -0.99
CDH3-206ENST00000567674 PLXNB1O43157 2135 aa8.83□□□□□ -1
CDH3-206ENST00000567674 METTL21EPA6NDL7 271 aa8.83□□□□□ -1
CDH3-206ENST00000567674 NDUFA3O95167 84 aa8.83□□□□□ -1
CDH3-206ENST00000567674 IGHV3-7P01780 117 aa8.83□□□□□ -1
CDH3-206ENST00000567674 IGHG4P01861 327 aa8.83□□□□□ -1
CDH3-206ENST00000567674 HLA-DRB1P01911 266 aa8.83□□□□□ -1
CDH3-206ENST00000567674 PF4P02776 101 aa8.83□□□□□ -1
CDH3-206ENST00000567674 CRIP2P52943 208 aaPredicted RBP8.83□□□□□ -1
CDH3-206ENST00000567674 SCAND1P57086 179 aa8.83□□□□□ -1
CDH3-206ENST00000567674 RPL23AP62750 156 aaKnown RBP8.83□□□□□ -1
CDH3-206ENST00000567674 FABP5Q01469 135 aa8.83□□□□□ -1
CDH3-206ENST00000567674 INSL4Q14641 139 aa8.83□□□□□ -1
CDH3-206ENST00000567674 KIR2DS1Q14954 304 aa8.83□□□□□ -1
CDH3-206ENST00000567674 C2orf76Q3KRA6 126 aa8.83□□□□□ -1
CDH3-206ENST00000567674 C9orf152Q5JTZ5 239 aa8.83□□□□□ -1
CDH3-206ENST00000567674 UBE2UQ5VVX9 321 aa8.83□□□□□ -1
CDH3-206ENST00000567674 Q6ZS49 121 aa8.83□□□□□ -1
CDH3-206ENST00000567674 C6orf201Q7Z4U5 140 aa8.83□□□□□ -1
CDH3-206ENST00000567674 TPRA1Q86W33 373 aa8.83□□□□□ -1
CDH3-206ENST00000567674 ODF3L1Q8IXM7 274 aa8.83□□□□□ -1
CDH3-206ENST00000567674 PRR18Q8N4B5 295 aa8.83□□□□□ -1
CDH3-206ENST00000567674 TMEM203Q969S6 136 aa8.83□□□□□ -1
CDH3-206ENST00000567674 NABP2Q9BQ15 211 aa8.83□□□□□ -1
CDH3-206ENST00000567674 AGMATQ9BSE5 352 aa8.83□□□□□ -1
CDH3-206ENST00000567674 IGHV3-43A0A0B4J1X8 118 aa8.82□□□□□ -1
CDH3-206ENST00000567674 A0A1W2PPE3 182 aa8.82□□□□□ -1
CDH3-206ENST00000567674 IFITM5A6NNB3 132 aa8.82□□□□□ -1
CDH3-206ENST00000567674 G3V4G9 280 aa8.82□□□□□ -1
CDH3-206ENST00000567674 ARPC1BO15143 372 aaKnown RBP8.82□□□□□ -1
CDH3-206ENST00000567674 IGHV3-43DP0DP04 118 aa8.82□□□□□ -1
CDH3-206ENST00000567674 VDAC1P21796 283 aa8.82□□□□□ -1
CDH3-206ENST00000567674 GADD45AP24522 165 aa8.82□□□□□ -1
CDH3-206ENST00000567674 MYL9P24844 172 aa8.82□□□□□ -1
CDH3-206ENST00000567674 THBS3P49746 956 aa8.82□□□□□ -1
CDH3-206ENST00000567674 TMEM50BP56557 158 aa8.82□□□□□ -1
CDH3-206ENST00000567674 RPS25P62851 125 aaKnown RBP8.82□□□□□ -1
CDH3-206ENST00000567674 MRPS15P82914 257 aaKnown RBP8.82□□□□□ -1
CDH3-206ENST00000567674 HNF4GQ14541 408 aa8.82□□□□□ -1
CDH3-206ENST00000567674 TMEM95Q3KNT9 176 aa8.82□□□□□ -1
CDH3-206ENST00000567674 CXorf66Q5JRM2 361 aaPredicted RBP8.82□□□□□ -1
CDH3-206ENST00000567674 NKAPLQ5M9Q1 402 aa8.82□□□□□ -1
CDH3-206ENST00000567674 ZNF660Q6AZW8 331 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms