RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 GHRLQ9UBU3 117 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 ST3GAL6Q9Y274 331 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 MRPS28Q9Y2Q9 187 aaKnown RBP12.99□□□□□ -0.33
TSR3-202ENST00000566296 CEPT1Q9Y6K0 416 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 U3KQK5 164 aa12.99□□□□□ -0.33
TSR3-202ENST00000566296 SMIM31A0A1B0GVY4 71 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 NOTOA8MTQ0 251 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 SDCBPO00560 298 aaPredicted RBP12.98□□□□□ -0.33
TSR3-202ENST00000566296 SLC17A2O00624 439 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 SLC22A1O15245 554 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 ZNF780AO75290 641 aaPredicted RBP12.98□□□□□ -0.33
TSR3-202ENST00000566296 ELANEP08246 267 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 GZMHP20718 246 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 HTR2CP28335 458 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 SERPINB10P48595 397 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 LUMP51884 338 aaPredicted RBP12.98□□□□□ -0.33
TSR3-202ENST00000566296 RBM11P57052 281 aaKnown RBP12.98□□□□□ -0.33
TSR3-202ENST00000566296 MXD1Q05195 221 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 FOXE3Q13461 319 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 AWAT2Q6E213 333 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 ASCL4Q6XD76 172 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 LINC00596Q86U02 117 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 CROCCP3Q8IVE0 287 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 LINC00311Q8N616 119 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 Q8N6K4 173 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 Q8N9W7 124 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 Q8NFD4 153 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 OR52M1Q8NGK5 317 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 ARL11Q969Q4 196 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 RASL11BQ9BPW5 248 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 IFT22Q9H7X7 185 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
TSR3-202ENST00000566296 CCDC160A6NGH7 325 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 IFITM5A6NNB3 132 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 ZNF701M0R085 212 aaPredicted RBP12.97□□□□□ -0.33
TSR3-202ENST00000566296 TXNL1O43396 289 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 TMEM127O75204 238 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 UBBP0CG47 229 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 VDAC1P21796 283 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 TGFBR1P36897 503 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 OR10A3P58181 314 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 GPR176Q14439 515 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 KIR2DS1Q14954 304 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 RAB11BQ15907 218 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 MPV17LQ2QL34 196 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 NHLRC3Q5JS37 347 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 ATAD3CQ5T2N8 411 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 LCNL1Q6ZST4 164 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 C8orf31Q8N9H6 132 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 RBM38Q9H0Z9 239 aaKnown RBP12.97□□□□□ -0.33
TSR3-202ENST00000566296 RAB9BQ9NP90 201 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 IL36GQ9NZH8 169 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 ING4Q9UNL4 249 aa12.97□□□□□ -0.33
TSR3-202ENST00000566296 LINC01548A6NM66 108 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 SEC14L6B5MCN3 397 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 AIPO00170 330 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 MOSP00540 346 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 SERPINA2P20848 420 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 CD1BP29016 333 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 RPS19P39019 145 aaKnown RBP12.96□□□□□ -0.33
TSR3-202ENST00000566296 ECI1P42126 302 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 CDX1P47902 265 aaPredicted RBP12.96□□□□□ -0.33
TSR3-202ENST00000566296 Q3ZCU0 254 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 SFXN4Q6P4A7 337 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 GLIPR1L1Q6UWM5 242 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 NR2C2APQ86WQ0 139 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 RNF152Q8N8N0 203 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 OR8H1Q8NGG4 311 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 UBALD1Q8TB05 177 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 CCDC107Q8WV48 283 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 RTN4IP1Q8WWV3 396 aaPredicted RBP12.96□□□□□ -0.33
TSR3-202ENST00000566296 PRR25Q96S07 402 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 S1PR3Q99500 378 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 DCSTAMPQ9H295 470 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 RSL24D1Q9UHA3 163 aaKnown RBP12.96□□□□□ -0.33
TSR3-202ENST00000566296 STEAP1Q9UHE8 339 aa12.96□□□□□ -0.33
TSR3-202ENST00000566296 IGHV3-43A0A0B4J1X8 118 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 DPPA5A6NC42 116 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 H3BMQ9 156 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 C15orf65H3BRN8 121 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 GEMIN2O14893 280 aaKnown RBP12.95□□□□□ -0.34
TSR3-202ENST00000566296 ORC5O43913 435 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 BPNT1O95861 308 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 IGHV3-43DP0DP04 118 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 HES5Q5TA89 166 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 C4orf3Q8WVX3 66 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 SLC25A46Q96AG3 418 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 MRPS24Q96EL2 167 aaKnown RBP12.95□□□□□ -0.34
TSR3-202ENST00000566296 CST11Q9H112 138 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 ZNF581Q9P0T4 197 aa12.95□□□□□ -0.34
TSR3-202ENST00000566296 SORL1Q92673 2214 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 SMIM30A4D0T7 59 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 OR5H8P0DN80 308 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 ARSBP15848 533 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 SOX6P35712 828 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 TMEM30BQ3MIR4 351 aa12.94□□□□□ -0.34
TSR3-202ENST00000566296 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms