RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TMEM235A6NFC5 223 aa16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 ITGB1BP1O14713 200 aa16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 HSD17B6O14756 317 aa16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 SLC31A2O15432 143 aa16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 ZBTB25P24278 435 aa16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 DHRS7BQ6IAN0 325 aaPredicted RBP16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 C5orf24Q7Z6I8 188 aa16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 S100A16Q96FQ6 103 aaKnown RBP16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 CABLES2Q9BTV7 478 aa16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 C1RLQ9NZP8 487 aa16.94■□□□□ 0.3
SHCBP1-205ENST00000566016 A6NDX4 124 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 FABP7O15540 132 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 TXNL1O43396 289 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 XRCC3O43542 346 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 SCTP09683 121 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 HABP2Q14520 560 aaPredicted RBP16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 OR2AK2Q8NG84 335 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 SLC23A1Q9UHI7 598 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 ELF5Q9UKW6 265 aaPredicted RBP16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 APOA1P02647 267 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 GAPDHP04406 335 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 ZNF182P17025 639 aaPredicted RBP16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 RAB13P51153 203 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 GNG2P59768 71 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 RELBQ01201 579 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 HERPUD1Q15011 391 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 LY6EQ16553 131 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 EDARADDQ8WWZ3 215 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 TOLLIPQ9H0E2 274 aa16.93■□□□□ 0.3
SHCBP1-205ENST00000566016 TRAV18A0A075B6X5 111 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 IGKV1-6A0A0C4DH72 117 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 CHST1O43916 411 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 NOL3O60936 208 aaKnown RBP16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 LPLP06858 475 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 THNSL2Q86YJ6 484 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 OR4F5Q8NH21 305 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 NUDCD2Q8WVJ2 157 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 RTN4IP1Q8WWV3 396 aaPredicted RBP16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 CFHR4Q92496 578 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 GHITMQ9H3K2 345 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 RANBP3Q9H6Z4 567 aaPredicted RBP16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 AUNIPQ9H7T9 357 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 ZNF230Q9UIE0 474 aaPredicted RBP16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 MMP24Q9Y5R2 645 aa16.92■□□□□ 0.3
SHCBP1-205ENST00000566016 A0A1B0GUS0 222 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 FAM90A9PA6NNJ1 464 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 TIMM23O14925 209 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 HSPA12AO43301 675 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 RAG2P55895 527 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 DIAPH2-AS1Q14236 149 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 SPCS2Q15005 226 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 MZT2AQ6P582 158 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 CCBE1Q6UXH8 406 aaPredicted RBP16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 C16orf82Q7Z2V1 217 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 ISOC1Q96CN7 298 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 OR1A1Q9P1Q5 309 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 COMMD3Q9UBI1 195 aa16.91■□□□□ 0.3
SHCBP1-205ENST00000566016 DNHD1Q96M86 4753 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 IGHV1-3A0A0C4DH29 117 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 LANCL1O43813 399 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 SSX5O60225 188 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 TSPAN9O75954 239 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 SOX6P35712 828 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 ANK2Q01484 3957 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 AWAT1Q58HT5 328 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 TMEM69Q5SWH9 247 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 FAM71F2Q6NXP2 309 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 ODF3L1Q8IXM7 274 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 LYG1Q8N1E2 194 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 DTX3Q8N9I9 347 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 OR56B4Q8NH76 319 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 AGMATQ9BSE5 352 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 IFI27L2Q9H2X8 130 aa16.9■□□□□ 0.3
SHCBP1-205ENST00000566016 TRBV6-7A0A0A0MS04 114 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 H3BMQ9 156 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 FAM106CPP0CH98 169 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 CEACAM6P40199 344 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 TGIF2LXQ8IUE1 241 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 IZUMO1Q8IYV9 350 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 DRAM1Q8N682 238 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 NPFFR1Q9GZQ6 430 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 CCDC59Q9P031 241 aaKnown RBP16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 PIPOXQ9P0Z9 390 aa16.89■□□□□ 0.29
SHCBP1-205ENST00000566016 EIF4EP06730 217 aaKnown RBP16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 GSTT2P0CG29 244 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 GSTT2BP0CG30 244 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 IGSF11Q5DX21 431 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 Q6ZSV7 163 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 ZNF833PQ6ZTB9 187 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 TMEM219Q86XT9 240 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 OR10J5Q8NHC4 309 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 DYNC2LI1Q8TCX1 351 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 MAFIPQ8WZ33 124 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 AKR1E2Q96JD6 320 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 PARP12Q9H0J9 701 aaKnown RBP16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 C16orf95Q9H693 158 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 CEPT1Q9Y6K0 416 aa16.88■□□□□ 0.29
SHCBP1-205ENST00000566016 SAA2-SAA4A0A096LPE2 208 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 RAB29O14966 203 aa16.87■□□□□ 0.29
SHCBP1-205ENST00000566016 CTXN2P0C2S0 81 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms