RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 KCNJ3P48549 501 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 ARPP19P56211 112 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 COPZ1P61923 177 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF616Q08AN1 781 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 COTL1Q14019 142 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF846Q147U1 533 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 USF2Q15853 346 aaPredicted RBP2.65□□□□□ -1.99
LINC00560-201ENST00000564593 MOGQ16653 247 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 SPIN4Q56A73 249 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 CLLU1OSQ5K130 101 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 TMEM236Q5W0B7 351 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 GLYATQ6IB77 296 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 SLC25A34Q6PIV7 304 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 UNQ9165/PRO28630Q6UXU0 137 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 CPNE9Q8IYJ1 553 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 DRAM1Q8N682 238 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 OR51L1Q8NGJ5 315 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 OR9I1Q8NGQ6 314 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 OR13C4Q8NGS5 318 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 OR5K1Q8NHB7 308 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 SKA2Q8WVK7 121 aaPredicted RBP2.65□□□□□ -1.99
LINC00560-201ENST00000564593 OR8D1Q8WZ84 308 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 RORBQ92753 470 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 TMEM159Q96B96 161 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF514Q96K75 400 aaPredicted RBP2.65□□□□□ -1.99
LINC00560-201ENST00000564593 TRNT1Q96Q11 434 aaKnown RBP2.65□□□□□ -1.99
LINC00560-201ENST00000564593 OR52E6Q96RD3 313 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 LYSMD1Q96S90 227 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 CHCHD7Q9BUK0 85 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 SFXN3Q9BWM7 321 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 CHID1Q9BWS9 393 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 PRRG3Q9BZD7 231 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 GABARAPL1Q9H0R8 117 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 CXCL16Q9H2A7 254 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 TRIM45Q9H8W5 580 aaPredicted RBP2.65□□□□□ -1.99
LINC00560-201ENST00000564593 PAIP2BQ9ULR5 123 aaKnown RBP2.65□□□□□ -1.99
LINC00560-201ENST00000564593 FARSAQ9Y285 508 aaKnown RBP2.65□□□□□ -1.99
LINC00560-201ENST00000564593 POLR3HQ9Y535 204 aaPredicted RBP2.65□□□□□ -1.99
LINC00560-201ENST00000564593 S4R3C0 116 aa2.65□□□□□ -1.99
LINC00560-201ENST00000564593 COL27A1Q8IZC6 1860 aaPredicted RBP2.64□□□□□ -1.99
LINC00560-201ENST00000564593 CCDC88CQ9P219 2028 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 IRGMA1A4Y4 181 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 CLDN25C9JDP6 229 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 CXCR6O00574 342 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 RFXANKO14593 260 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 COCHO43405 550 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 UPK1BO75841 260 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 OR4Q2P0C623 313 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 OCM2P0CE71 109 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 OCMP0CE72 109 aaPredicted RBP2.64□□□□□ -1.99
LINC00560-201ENST00000564593 RANBP1P43487 201 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 SMIM11AP58511 58 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 DEFA1P59665 94 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 DEFA3P59666 94 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 UBE2IP63279 158 aaKnown RBP2.64□□□□□ -1.99
LINC00560-201ENST00000564593 FADDQ13158 208 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 GNA13Q14344 377 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 GPR176Q14439 515 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 NEDD8Q15843 81 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 C6orf99Q4VX62 202 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 SBSNQ6UWP8 590 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 CYP4Z1Q86W10 505 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 FUNDC1Q8IVP5 155 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 OR9Q1Q8NGQ5 310 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 OR6K6Q8NGW6 343 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 OR10Z1Q8NGY1 313 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 OR1L1Q8NH94 360 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 ENKURQ8TC29 256 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 LRRC20Q8TCA0 184 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 EEF1AKMT1Q8WVE0 214 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 RASSF5Q8WWW0 418 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 TFGQ92734 400 aaPredicted RBP2.64□□□□□ -1.99
LINC00560-201ENST00000564593 TMBIM1Q969X1 311 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 C12orf43Q96C57 262 aaKnown RBP2.64□□□□□ -1.99
LINC00560-201ENST00000564593 OTUB2Q96DC9 234 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 FAM19A4Q96LR4 140 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 EFCAB11Q9BUY7 163 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF717Q9BY31 904 aaPredicted RBP2.64□□□□□ -1.99
LINC00560-201ENST00000564593 RAB1BQ9H0U4 201 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 CACYBPQ9HB71 228 aaKnown RBP2.64□□□□□ -1.99
LINC00560-201ENST00000564593 CMTM6Q9NX76 183 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 NDRG2Q9UN36 371 aaKnown RBP2.64□□□□□ -1.99
LINC00560-201ENST00000564593 ANGPT4Q9Y264 503 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 SIGLEC7Q9Y286 467 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 SIGLEC9Q9Y336 463 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 PKD1L2Q7Z442 2459 aa2.64□□□□□ -1.99
LINC00560-201ENST00000564593 NINQ8N4C6 2090 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 A0A0D9SEW6 157 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 ISPDA4D126 451 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 ARRDC5A6NEK1 342 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 MGAT4DA6NG13 374 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 OR51F1A6NGY5 319 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 PSPHP1O15172 72 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 ETHE1O95571 254 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 KRT75O95678 551 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 PIRTP0C851 137 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 CRHBPP24387 322 aa2.63□□□□□ -1.99
LINC00560-201ENST00000564593 S100A5P33763 92 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms