RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 Q6ZR03 302 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 Q6ZS49 121 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 DOLPP1Q86YN1 238 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 C11orf53Q8IXP5 236 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 MKXQ8IYA7 352 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 RNASEH2CQ8TDP1 164 aaKnown RBP8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 HIST1H2BLQ99880 126 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 OR2S2Q9NQN1 319 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 ZNF835Q9Y2P0 537 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 MMP24Q9Y5R2 645 aa8.66□□□□□ -1.02
TUBGCP4-202ENST00000561691 SPTBN4Q9H254 2564 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 TRAV24A0A0B4J272 114 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 TAAR5O14804 337 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 OR7C1O76099 320 aaPredicted RBP8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 DUS4LO95620 317 aaKnown RBP8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 GZMBP10144 247 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 PI3P19957 117 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 KITLGP21583 273 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 CCKARP32238 428 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 MRPL49Q13405 166 aaKnown RBP8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 RPL7L1Q6DKI1 246 aaKnown RBP8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 ZNF573Q86YE8 665 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 CISD2Q8N5K1 135 aaKnown RBP8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 Q8WTZ3 238 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 SFXN3Q9BWM7 321 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 ACTR3CQ9C0K3 210 aaPredicted RBP8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 TAF9BQ9HBM6 251 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 OR14J1Q9UGF5 321 aa8.65□□□□□ -1.02
TUBGCP4-202ENST00000561691 LRP5LA4QPB2 252 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 C5orf51A6NDU8 294 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 ZNF205O95201 554 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 CXCL1P09341 107 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 GLRA1P23415 457 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 LMO1P25800 156 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 DUSP1P28562 367 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 ZNF154Q13106 437 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 IL13RA2Q14627 380 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 ELOBQ15370 118 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 MPV17LQ2QL34 196 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 CHRFAM7AQ494W8 412 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 FAM180AQ6UWF9 173 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 SCCPDHQ8NBX0 429 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 HIST1H2AAQ96QV6 131 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 OR5AC2Q9NZP5 309 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 AMDHD2Q9Y303 409 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 A0A087WWC5 75 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 A8MXE2 369 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 TRAPPC2LH3BP13 241 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 M0R143 59 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 SOX15O60248 233 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 SFT2D2O95562 160 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 TSPAN15O95858 294 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 PGA5P0DJD9 388 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 OR5H8P0DN80 308 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 SELEP16581 610 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 AKR1C4P17516 323 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 TAS2R31P59538 309 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 IL13RA1P78552 427 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 HERPUD1Q15011 391 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 SRSF7Q16629 238 aaKnown RBP eCLIP8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 TMEM128Q5BJH2 165 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 TIMM23BQ5SRD1 257 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 MBNL2Q5VZF2 373 aaKnown RBP8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 GGNBP1Q5YKI7 109 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 ZNF880Q6PDB4 577 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 CLEC18BQ6UXF7 455 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 OR8G5Q8NG78 346 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 ZNF2Q9BSG1 426 aaPredicted RBP8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 RTL8AQ9BWD3 113 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 SLC35B3Q9H1N7 401 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 HES4Q9HCC6 221 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 Q9N2K0 584 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 MAP1BP46821 2468 aaKnown RBP8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 SHANK1Q9Y566 2161 aa8.64□□□□□ -1.03
TUBGCP4-202ENST00000561691 ZZEF1O43149 2961 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 ESPL1Q14674 2120 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 TRBV6-6A0A0A6YYG2 114 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 IGKV1-6A0A0C4DH72 117 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 A0A0G2JNJ9 132 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 HAX1O00165 279 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 GAPDHP04406 335 aaKnown RBP8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 TUBG1P23258 451 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 HOXA4Q00056 320 aaPredicted RBP8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 C3orf36Q3SXR2 165 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 MIDNQ504T8 468 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 AKR1C8PQ5T2L2 129 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 SLC22A25Q6T423 547 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 LINC00596Q86U02 117 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 FAM58AQ8N1B3 248 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 SUMF2Q8NBJ7 301 aa8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 SNRNP40Q96DI7 357 aaKnown RBP8.63□□□□□ -1.03
TUBGCP4-202ENST00000561691 RCC1LQ96I51 464 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms