RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LIN54Q6MZP7 749 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 KCTD20Q7Z5Y7 419 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 ACBD7Q8N6N7 88 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 OR14K1Q8NGZ2 314 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 MRGPRDQ8TDS7 321 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 TMEM80Q96HE8 168 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 MFFQ9GZY8 342 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 HMG20AQ9NP66 347 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 ZNF355PQ9NSJ1 428 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 AASSQ9UDR5 926 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 FBXL17Q9UF56 701 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 KIF25Q9UIL4 384 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 TP53TG1Q9Y2A0 90 aa7.18□□□□□ -1.26
HERC1-210ENST00000560897 SLC33A1O00400 549 aaPredicted RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 MYL12BO14950 172 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 NBR2O15453 112 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 ZNF254O75437 659 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 CDK2AP2O75956 126 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 APOL3O95236 402 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 GNAO1P09471 354 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 OCM2P0CE71 109 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 OCMP0CE72 109 aaPredicted RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 DBTP11182 482 aaKnown RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 ALOX5APP20292 161 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 SSTR5P35346 364 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 RBP2P50120 134 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 GBX2P52951 348 aaPredicted RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 ACTBP60709 375 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 PLGLAQ15195 96 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 RBMS2Q15434 407 aaKnown RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 UBE2V2Q15819 145 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 RPEL1Q2QD12 228 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 CD300EQ496F6 205 aaPredicted RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 RBM48Q5RL73 367 aaKnown RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 ZNF322Q6U7Q0 402 aaPredicted RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 IL34Q6ZMJ4 242 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 GVQW1Q8N7I0 195 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 YTHDF1Q9BYJ9 559 aaKnown RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 COMMD4Q9H0A8 199 aa7.17□□□□□ -1.26
HERC1-210ENST00000560897 CNOT2Q9NZN8 540 aaKnown RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 EXOSC1Q9Y3B2 195 aaKnown RBP7.17□□□□□ -1.26
HERC1-210ENST00000560897 A0A0G2JLM5 398 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 NPIPB11E5RHQ5 1161 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 J3QLW9 94 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 SDCBPO00560 298 aaPredicted RBP7.16□□□□□ -1.26
HERC1-210ENST00000560897 RGS10O43665 173 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 AIREO43918 545 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 RPP14O95059 124 aaKnown RBP7.16□□□□□ -1.26
HERC1-210ENST00000560897 CGB3P0DN86 165 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 CGB7P0DN87 165 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 ZNF19P17023 458 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 SLC2A5P22732 501 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 HCCSP53701 268 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 APOC4P55056 127 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 MTCP1P56278 107 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 ST3GAL4Q11206 333 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 MRPL28Q13084 256 aaKnown RBP7.16□□□□□ -1.26
HERC1-210ENST00000560897 C5orf64Q2M2E5 130 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 DEFB135Q30KP9 77 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 PAN3Q58A45 887 aaKnown RBP7.16□□□□□ -1.26
HERC1-210ENST00000560897 ZNF660Q6AZW8 331 aaPredicted RBP7.16□□□□□ -1.26
HERC1-210ENST00000560897 UNQ5815/PRO19632Q6UWF5 114 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 AHSA2Q719I0 299 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 LHFPL3Q86UP9 236 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 ZNF679Q8IYX0 411 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 LINC00311Q8N616 119 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 OR51T1Q8NGJ9 327 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 SVIPQ8NHG7 77 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 GGHQ92820 318 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 LGALS12Q96DT0 336 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 CHST5Q9GZS9 411 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 LINC00574Q9H8X3 128 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 ADGRL4Q9HBW9 690 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 VCX3AQ9NNX9 186 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 BATF3Q9NR55 127 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 MBNL3Q9NUK0 354 aaKnown RBP7.16□□□□□ -1.26
HERC1-210ENST00000560897 GNG8Q9UK08 70 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 OR52A1Q9UKL2 312 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 EXOGQ9Y2C4 368 aaKnown RBP7.16□□□□□ -1.26
HERC1-210ENST00000560897 MYRFQ9Y2G1 1151 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 LRRC42Q9Y546 428 aa7.16□□□□□ -1.26
HERC1-210ENST00000560897 A0A1W2PQL4 384 aaPredicted RBP7.15□□□□□ -1.26
HERC1-210ENST00000560897 CCDC182A6NF36 153 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 MSGN1A6NI15 193 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 METTL15A6NJ78 407 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 SYT7O43581 403 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 SULT1C4O75897 302 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 OR2A4O95047 310 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 RPSAP08865 295 aaKnown RBP7.15□□□□□ -1.26
HERC1-210ENST00000560897 GABRB1P18505 474 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 CRIP2P52943 208 aaPredicted RBP7.15□□□□□ -1.26
HERC1-210ENST00000560897 NDPQ00604 133 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 LSAMPQ13449 338 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 SMN1Q16637 294 aaKnown RBP7.15□□□□□ -1.26
HERC1-210ENST00000560897 Q6ZWC4 215 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 PPP1R27Q86WC6 154 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 ELMOD2Q8IZ81 293 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 Q8N1X5 172 aa7.15□□□□□ -1.26
HERC1-210ENST00000560897 SVOPQ8N4V2 548 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms