RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 NECAP2Q9NVZ3 263 aa12.75□□□□□ -0.37
SPG21-211ENST00000560564 NCBP2LA6PVI3 153 aaKnown RBP12.74□□□□□ -0.37
SPG21-211ENST00000560564 SLC17A2O00624 439 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 YPEL1O60688 119 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 PF4P02776 101 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 F2RL1P55085 397 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 KHDC1LQ5JSQ8 128 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 OR2W3Q7Z3T1 314 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 FOXRED2Q8IWF2 684 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 FAM89BQ8N5H3 189 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 OR8H1Q8NGG4 311 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 YPEL2Q96QA6 119 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 AURKAIP1Q9NWT8 199 aaPredicted RBP12.74□□□□□ -0.37
SPG21-211ENST00000560564 KCNIP1Q9NZI2 227 aa12.74□□□□□ -0.37
SPG21-211ENST00000560564 AP4M1O00189 453 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 HSMCR30P0CW71 290 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 MAP2K4P45985 399 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 CFHR3Q02985 330 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 ZNF833PQ6ZTB9 187 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 MRPL41Q8IXM3 137 aaKnown RBP12.73□□□□□ -0.37
SPG21-211ENST00000560564 COMMD1Q8N668 190 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 MGLLQ99685 303 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 NABP2Q9BQ15 211 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 HSPB9Q9BQS6 159 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 IFI27L2Q9H2X8 130 aa12.73□□□□□ -0.37
SPG21-211ENST00000560564 AK6Q9Y3D8 172 aaKnown RBP12.73□□□□□ -0.37
SPG21-211ENST00000560564 COL7A1Q02388 2944 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 SOCS1O15524 211 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 PSMA1P25786 263 aaKnown RBP12.72□□□□□ -0.37
SPG21-211ENST00000560564 BLVRBP30043 206 aaPredicted RBP12.72□□□□□ -0.37
SPG21-211ENST00000560564 THBS3P49746 956 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 SLC35B1P78383 322 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 FABP5Q01469 135 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 P2RY14Q15391 338 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 TRAM1Q15629 374 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 RNF152Q8N8N0 203 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 GALMQ96C23 342 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 RCC1LQ96I51 464 aaKnown RBP12.72□□□□□ -0.37
SPG21-211ENST00000560564 ZNF251Q9BRH9 671 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 MRPL20Q9BYC9 149 aaKnown RBP12.72□□□□□ -0.37
SPG21-211ENST00000560564 ZFP57Q9NU63 452 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 ZNF580Q9UK33 172 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 LRRC42Q9Y546 428 aa12.72□□□□□ -0.37
SPG21-211ENST00000560564 SAA2-SAA4A0A096LPE2 208 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 LDLRAD4O15165 306 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 ARL6IP5O75915 188 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 SAA2P0DJI9 122 aaPredicted RBP12.71□□□□□ -0.37
SPG21-211ENST00000560564 SLC6A1P30531 599 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 OR3A3P47888 321 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 TMEM50BP56557 158 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 TBCEQ15813 527 aaPredicted RBP12.71□□□□□ -0.37
SPG21-211ENST00000560564 SSX1Q16384 188 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 C8orf86Q6ZUL3 223 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 RITA1Q96K30 269 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 P2RX4Q99571 388 aa12.71□□□□□ -0.37
SPG21-211ENST00000560564 HDHD3Q9BSH5 251 aaPredicted RBP12.71□□□□□ -0.37
SPG21-211ENST00000560564 YTHDF1Q9BYJ9 559 aaKnown RBP12.71□□□□□ -0.37
SPG21-211ENST00000560564 PARP12Q9H0J9 701 aaKnown RBP12.71□□□□□ -0.37
SPG21-211ENST00000560564 RGS11O94810 467 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 IGF1P05019 195 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 ARSBP15848 533 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 CALRP27797 417 aaKnown RBP12.7□□□□□ -0.38
SPG21-211ENST00000560564 SOX6P35712 828 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 GABARAPL2P60520 117 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 PNLIPRP3Q17RR3 467 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 TEX38Q6PEX7 206 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 MOB1BQ7L9L4 216 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 OR2AK2Q8NG84 335 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 RASL11BQ9BPW5 248 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 PLGRKTQ9HBL7 147 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 PLEKHJ1Q9NW61 149 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 AK3Q9UIJ7 227 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 HSF4Q9ULV5 492 aa12.7□□□□□ -0.38
SPG21-211ENST00000560564 SHISA3A0PJX4 238 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
SPG21-211ENST00000560564 RPLP1P05386 114 aaKnown RBP12.69□□□□□ -0.38
SPG21-211ENST00000560564 CNTFRP26992 372 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 CLDN12P56749 244 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 KRTAP10-11P60412 298 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 ACTBP60709 375 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 MMDQ15546 238 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 RAB11BQ15907 218 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 FAM71F2Q6NXP2 309 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 LCNL1Q6ZST4 164 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 ZNF695Q8IW36 515 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 KLHL30-AS1Q8NEE0 82 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 OR51D1Q8NGF3 324 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 MRAPQ8TCY5 172 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 IL1F10Q8WWZ1 152 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 AGMATQ9BSE5 352 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 URM1Q9BTM9 101 aaKnown RBP12.69□□□□□ -0.38
SPG21-211ENST00000560564 RIMS4Q9H426 269 aaPredicted RBP12.69□□□□□ -0.38
SPG21-211ENST00000560564 ABRACLQ9P1F3 81 aa12.69□□□□□ -0.38
SPG21-211ENST00000560564 ITGB1BP1O14713 200 aa12.68□□□□□ -0.38
SPG21-211ENST00000560564 IGHG4P01861 327 aa12.68□□□□□ -0.38
SPG21-211ENST00000560564 ELANEP08246 267 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms