RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 GCDHQ92947 438 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-208ENST00000560427 CABLES2Q9BTV7 478 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 GHITMQ9H3K2 345 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 TNFRSF19Q9NS68 423 aa10.48□□□□□ -0.73
NEDD8-208ENST00000560427 TRAV18A0A075B6X5 111 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 TMEM235A6NFC5 223 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 HSD17B6O14756 317 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 IGHV3-7P01780 117 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 APOA1P02647 267 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 GAPDHP04406 335 aaKnown RBP10.47□□□□□ -0.73
NEDD8-208ENST00000560427 PPP1CCP36873 323 aaKnown RBP10.47□□□□□ -0.73
NEDD8-208ENST00000560427 GNMTQ14749 295 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 CT45A1Q5HYN5 189 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 FAM71F2Q6NXP2 309 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 OR4F5Q8NH21 305 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 CT45A3Q8NHU0 189 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 ST6GALNAC6Q969X2 333 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 TOLLIPQ9H0E2 274 aa10.47□□□□□ -0.73
NEDD8-208ENST00000560427 RANBP3Q9H6Z4 567 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-208ENST00000560427 A0A1W2PPE3 182 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 A0A1W2PPI3 338 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 A6NDX4 124 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 HSPA12AO43301 675 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 SCTP09683 121 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 FAM106CPP0CH98 169 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 PAX6P26367 422 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 ZNF134P52741 427 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 HABP2Q14520 560 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-208ENST00000560427 PLA1AQ53H76 456 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 TMEM69Q5SWH9 247 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 THNSL2Q86YJ6 484 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 ISOC1Q96CN7 298 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 AKR1E2Q96JD6 320 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 AUNIPQ9H7T9 357 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 C1RLQ9NZP8 487 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 CCDC59Q9P031 241 aaKnown RBP10.46□□□□□ -0.73
NEDD8-208ENST00000560427 PIPOXQ9P0Z9 390 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 COMMD3Q9UBI1 195 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 SLC23A1Q9UHI7 598 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 MMP24Q9Y5R2 645 aa10.46□□□□□ -0.73
NEDD8-208ENST00000560427 FAM90A9PA6NNJ1 464 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 SLC31A2O15432 143 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 LANCL1O43813 399 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 CTXN2P0C2S0 81 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 CBX5P45973 191 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 RAG2P55895 527 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 SPCS2Q15005 226 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 LY6EQ16553 131 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 FAM53AQ6NSI3 398 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-208ENST00000560427 TGIF2LXQ8IUE1 241 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 IZUMO1Q8IYV9 350 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 LYG1Q8N1E2 194 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 OR10J5Q8NHC4 309 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 NUDCD2Q8WVJ2 157 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 RTN4IP1Q8WWV3 396 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-208ENST00000560427 NPFFR1Q9GZQ6 430 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 IFI27L2Q9H2X8 130 aa10.45□□□□□ -0.74
NEDD8-208ENST00000560427 FBN1P35555 2871 aaKnown RBP10.45□□□□□ -0.74
NEDD8-208ENST00000560427 TRBV6-7A0A0A0MS04 114 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 IGHV1-3A0A0C4DH29 117 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 IGKV1-6A0A0C4DH72 117 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 SMIM31A0A1B0GVY4 71 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 H3BMQ9 156 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 ZNF701M0R085 212 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-208ENST00000560427 TIMM23O14925 209 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 RAB29O14966 203 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 SSX5O60225 188 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 TSPAN9O75954 239 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 TPPPO94811 219 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 CEACAM6P40199 344 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 TAS2R20P59543 309 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 HERPUD1Q15011 391 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 C11orf88Q6PI97 169 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 OR4C13Q8NGP0 309 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 OR56B4Q8NH76 319 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 CFHR4Q92496 578 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 C16orf95Q9H693 158 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 BEX1Q9HBH7 125 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 OR1A1Q9P1Q5 309 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 ZNF230Q9UIE0 474 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-208ENST00000560427 ELF5Q9UKW6 265 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-208ENST00000560427 CEPT1Q9Y6K0 416 aa10.44□□□□□ -0.74
NEDD8-208ENST00000560427 M0QZK8 103 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 CHST1O43916 411 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 OR2F2O95006 317 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 EIF4EP06730 217 aaKnown RBP10.43□□□□□ -0.74
NEDD8-208ENST00000560427 GSTT2P0CG29 244 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 GSTT2BP0CG30 244 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 CD1BP29016 333 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 RAB13P51153 203 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 RELBQ01201 579 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 DIAPH2-AS1Q14236 149 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 AWAT1Q58HT5 328 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 CNIH2Q6PI25 160 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 CCBE1Q6UXH8 406 aaPredicted RBP10.43□□□□□ -0.74
NEDD8-208ENST00000560427 C12orf54Q6X4T0 127 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 ZNF833PQ6ZTB9 187 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 HOGA1Q86XE5 327 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms