RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SCN3BQ9NY72 215 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TP53TG3Q9ULZ0 132 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 YARS2Q9Y2Z4 477 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 A2ML1A8K2U0 1454 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ARHGEF5Q12774 1597 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 EIF2AK4Q9P2K8 1649 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TJP1Q07157 1748 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 COL14A1Q05707 1796 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM131Q92545 1883 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 CACNA1AO00555 2505 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TINCRA0A1B0GVN0 87 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM72A0PK05 275 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OR5B21A6NL26 309 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 UBFD1O14562 309 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RBFOX2O43251 390 aaKnown RBP eCLIP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 SCRG1O75711 98 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 GABARAPO95166 117 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 MT-CO2P00403 227 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 SERPINE1P05121 402 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 LIMS3P0CW19 117 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 LIMS4P0CW20 117 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 MYL2P10916 166 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 POLR2IP36954 125 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 P2RY1P47900 373 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RAB5CP51148 216 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 HCCSP53701 268 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 NDUFA6P56556 154 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TAS2R43P59537 309 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RAB2AP61019 212 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 BTN3A2P78410 334 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ARG2P78540 354 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PSG9Q00887 426 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OR5I1Q13606 314 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 GABRA6Q16445 453 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TTLL9Q3SXZ7 439 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TRMT12Q53H54 448 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TMPPEQ6ZT21 453 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 SSX7Q7RTT5 188 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 YIPF7Q8N8F6 280 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OR10AD1Q8NGE0 317 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 COQ8AQ8NI60 647 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 CANT1Q8WVQ1 401 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 C10orf82Q8WW14 230 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TCTEX1D2Q8WW35 142 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 CYGBQ8WWM9 190 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM101Q96IK0 257 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 VSIG2Q96IQ7 327 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ADTRPQ96IZ2 230 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF488Q96MN9 340 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 OXGR1Q96P68 337 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TSPAN32Q96QS1 320 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 LXNQ9BS40 222 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 TIMM29Q9BSF4 260 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 CCDC32Q9BV29 185 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RAB34Q9BZG1 259 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 FAM96AQ9H5X1 160 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PRORYQ9H606 182 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 RBFOX1Q9NWB1 397 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ARMCX1Q9P291 453 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 SMAD5-AS1Q9Y6J3 95 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 DLC1Q96QB1 1528 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 ADAMTS7Q9UKP4 1686 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 LAMB1P07942 1786 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 PLXNA4Q9HCM2 1894 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 BRCA1P38398 1863 aaKnown RBP1.22□□□□□ -2.21
HIF1A-212ENST00000557538 DOCK2Q92608 1830 aa1.22□□□□□ -2.21
HIF1A-212ENST00000557538 NRAPQ86VF7 1730 aa1.21□□□□□ -2.21
HIF1A-212ENST00000557538 ABCC8Q09428 1581 aa1.21□□□□□ -2.21
HIF1A-212ENST00000557538 TULP4Q9NRJ4 1543 aa1.21□□□□□ -2.21
HIF1A-212ENST00000557538 ADAMTS13Q76LX8 1427 aa1.21□□□□□ -2.21
HIF1A-212ENST00000557538 TRAV38-1A0A0B4J264 116 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ANKRD20A5PA0PJZ0 165 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 H7BYZ3 331 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TAAR5O14804 337 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF207O43670 478 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 EEDO75530 441 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CNMDO75829 334 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 SCGNO76038 276 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PMCHP20382 165 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PRTN3P24158 256 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 HTR1DP28221 377 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 BLVRBP30043 206 aaPredicted RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CTRLP40313 264 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 GZMMP51124 257 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CTBP2P56545 445 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RAB25P57735 213 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 KRTAP10-3P60369 221 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 RPS14P62263 151 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 CAV1Q03135 178 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 PSG7Q13046 419 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 FZD2Q14332 565 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 HERPUD1Q15011 391 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 EBPQ15125 230 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TSNQ15631 228 aaKnown RBP1.21□□□□□ -2.22
HIF1A-212ENST00000557538 VAX1Q5SQQ9 334 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM69Q5SWH9 247 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 LDLRAD2Q5SZI1 272 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 TPTE2P1Q5T6R2 138 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 OTPQ5XKR4 325 aa1.21□□□□□ -2.22
HIF1A-212ENST00000557538 DUSP18Q8NEJ0 188 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms