RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 OR11H1Q8NG94 326 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 CYYR1Q96J86 154 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 RITA1Q96K30 269 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 NEDD4LQ96PU5 975 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 NABP2Q9BQ15 211 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 ZNF251Q9BRH9 671 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 OR51J1Q9H342 316 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 SCOCQ9UIL1 159 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 ERGIC3Q9Y282 383 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 LSM4Q9Y4Z0 139 aaKnown RBP12.4□□□□□ -0.42
TUBB3-213ENST00000557262 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 SEC14L6B5MCN3 397 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 GNAO1P09471 354 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 ECI1P42126 302 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 FHL3Q13643 280 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 KIAA0141Q14154 515 aaPredicted RBP12.39□□□□□ -0.43
TUBB3-213ENST00000557262 ACSM3Q53FZ2 586 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 NKAPLQ5M9Q1 402 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 C6orf141Q5SZD1 244 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 LIN54Q6MZP7 749 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 MS4A15Q8N5U1 240 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 ZNF491Q8N8L2 437 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 MYOZ3Q8TDC0 251 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 FBLIM1Q8WUP2 373 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 UBE2E2Q96LR5 201 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 SULT4A1Q9BR01 284 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 FAAP24Q9BTP7 215 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 MRPL20Q9BYC9 149 aaKnown RBP12.39□□□□□ -0.43
TUBB3-213ENST00000557262 KLK15Q9H2R5 256 aa12.39□□□□□ -0.43
TUBB3-213ENST00000557262 G3V318 75 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 NBR2O15453 112 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 VSIG8P0DPA2 414 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 CNTFRP26992 372 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 CHATP28329 748 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 C1orf100Q5SVJ3 147 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 GLT8D1Q68CQ7 371 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 OR10K2Q6IF99 312 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 ZNF833PQ6ZTB9 187 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 NPBQ8NG41 125 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 OR1N2Q8NGR9 330 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 PRR25Q96S07 402 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 ANKRD60Q9BZ19 345 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 FKBP14Q9NWM8 211 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 ABRACLQ9P1F3 81 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 TENM3Q9P273 2699 aa12.38□□□□□ -0.43
TUBB3-213ENST00000557262 IGHV7-81A0A0B4J1V7 117 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 TRAV41A0A0B4J266 112 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 I3L521 148 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 ATP6V0E1O15342 81 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 IGLV1-40P01703 118 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 OR3A3P47888 321 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 RAB9AP51151 201 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 INSL3P51460 131 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 RPS27AP62979 156 aaKnown RBP12.37□□□□□ -0.43
TUBB3-213ENST00000557262 RUNX1Q01196 453 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 INSL4Q14641 139 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 RCN1Q15293 331 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 HMGN3Q15651 99 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 C5orf64Q2M2E5 130 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 ZNF260Q3ZCT1 412 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 C6orf201Q7Z4U5 140 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 LRRTM1Q86UE6 522 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 OR2AK2Q8NG84 335 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 KCNG3Q8TAE7 436 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 PHYHIPQ92561 330 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 PARP11Q9NR21 331 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 PIPOXQ9P0Z9 390 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 KIAA1456Q9P272 454 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 STEAP1Q9UHE8 339 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 VSIG4Q9Y279 399 aa12.37□□□□□ -0.43
TUBB3-213ENST00000557262 SAA2-SAA4A0A096LPE2 208 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 OR8U8P0C7N1 319 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 SAA2P0DJI9 122 aaPredicted RBP12.36□□□□□ -0.43
TUBB3-213ENST00000557262 CD37P11049 281 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 SRMP19623 302 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 HTR2CP28335 458 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 GABPB1Q06547 395 aaPredicted RBP12.36□□□□□ -0.43
TUBB3-213ENST00000557262 ZNF616Q08AN1 781 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 FAM27D1Q5T7N8 215 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 RNLSQ5VYX0 342 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 IL1F10Q8WWZ1 152 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 TM2D1Q9BX74 207 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 TMEM59Q9BXS4 323 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 U3KQK5 164 aa12.36□□□□□ -0.43
TUBB3-213ENST00000557262 RAB29O14966 203 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 NDUFA3O95167 84 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 CDK1P06493 297 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 BLVRBP30043 206 aaPredicted RBP12.35□□□□□ -0.43
TUBB3-213ENST00000557262 RBM48Q5RL73 367 aaKnown RBP12.35□□□□□ -0.43
TUBB3-213ENST00000557262 OGFRL1Q5TC84 451 aaPredicted RBP12.35□□□□□ -0.43
TUBB3-213ENST00000557262 ZNF660Q6AZW8 331 aaPredicted RBP12.35□□□□□ -0.43
TUBB3-213ENST00000557262 FAM71F2Q6NXP2 309 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 ZNF880Q6PDB4 577 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 MINDY2Q8NBR6 621 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 OR5B12Q96R08 314 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 TMED9Q9BVK6 235 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 MND1Q9BWT6 205 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 IFI27L2Q9H2X8 130 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms