RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 CD79BP40259 229 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 PSMB3P49720 205 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 CST9Q5W186 159 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 SCGB1D4Q6XE38 83 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 Q8N402 240 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 FER1L6-AS1Q8NA97 138 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 ERMNQ8TAM6 284 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 SPPL2BQ8TCT7 592 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 GALMQ96C23 342 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 PYURFQ96I23 114 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 TIPINQ9BVW5 301 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 GTSF1LQ9H1H1 148 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 TRIM45Q9H8W5 580 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-221ENST00000556534 UCK1Q9HA47 277 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 PARVAQ9NVD7 372 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 GLS2Q9UI32 602 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 LINC00527Q9UJ94 153 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 ZNF443Q9Y2A4 671 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-221ENST00000556534 LINC00588Q9Y4M8 146 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 U3KQK5 164 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 DSCAML1Q8TD84 2053 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 A0A1W2PP64 1363 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 ABCC11Q96J66 1382 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 PLB1Q6P1J6 1458 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 NPATQ14207 1427 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 LCTP09848 1927 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 A0A0B4J2C4 111 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 OR6C70A6NIJ9 312 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 B4DEV8 164 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 LRRN3E7EW58 273 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 PFDN6O15212 129 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 SSNA1O43805 119 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 GPR75O95800 540 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 IGLV6-57P01721 117 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 IL6P05231 212 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 KRT7P08729 469 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 OR13C7P0DN81 318 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 ORM2P19652 201 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 PSMA1P25786 263 aaKnown RBP1.92□□□□□ -2.1
SCFD1-221ENST00000556534 LINC00313P59037 77 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 GABARAPL2P60520 117 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 CXCR4P61073 352 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 MAGOHP61326 146 aaKnown RBP1.92□□□□□ -2.1
SCFD1-221ENST00000556534 HPCAP84074 193 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 DEFA6Q01524 100 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 TMEM267Q0VDI3 215 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-221ENST00000556534 PPP1R1AQ13522 171 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 IHHQ14623 411 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 PDGFRLQ15198 375 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 LCN8Q6JVE9 175 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 C3orf22Q8N5N4 141 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 PIGXQ8TBF5 258 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 CYGBQ8WWM9 190 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 PTH2Q96A98 100 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 ACY3Q96HD9 319 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 MAP1LC3AQ9H492 121 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 FGFR1OP2Q9NVK5 253 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 OR5V1Q9UGF6 321 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 PHLDA3Q9Y5J5 127 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 TRAPPC1Q9Y5R8 145 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 SNX10Q9Y5X0 201 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 ADAMTSL1Q8N6G6 1762 aa1.92□□□□□ -2.1
SCFD1-221ENST00000556534 CCDC180Q9P1Z9 1646 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 ATG2BQ96BY7 2078 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 ZNF638Q14966 1978 aaKnown RBP1.91□□□□□ -2.1
SCFD1-221ENST00000556534 OTOFQ9HC10 1997 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 THSD7AQ9UPZ6 1657 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 BRD4O60885 1362 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-221ENST00000556534 A6NED7 52 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 LECT2O14960 151 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 TGOLN2O43493 480 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 IFNA5P01569 189 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 HBZP02008 142 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 GYPCP04921 128 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 HRES1P13985 223 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 RPS12P25398 132 aaKnown RBP1.91□□□□□ -2.1
SCFD1-221ENST00000556534 HSPA9P38646 679 aaKnown RBP1.91□□□□□ -2.1
SCFD1-221ENST00000556534 NKX2-5P52952 324 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-221ENST00000556534 KLF3P57682 345 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-221ENST00000556534 DAD1P61803 113 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 APOFQ13790 326 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 IMPG1Q17R60 797 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 SPIN4Q56A73 249 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 HCP5Q6MZN7 132 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 CD200R1LQ6Q8B3 271 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 LRRN1Q6UXK5 716 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 DCXRQ7Z4W1 244 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 ZBTB8OSQ8IWT0 167 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 C10orf67Q8IYJ2 551 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 RPRMLQ8N4K4 120 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 OR51H1Q8NH63 302 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 OR2V1Q8NHB1 315 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 EEF1AKMT1Q8WVE0 214 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 TLCD1Q96CP7 247 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 HRASLSQ9HDD0 168 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 KCNIP2Q9NS61 270 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 BABAM2Q9NXR7 383 aa1.91□□□□□ -2.1
SCFD1-221ENST00000556534 RPUSD1Q9UJJ7 312 aaKnown RBP1.91□□□□□ -2.1
SCFD1-221ENST00000556534 MRPS16Q9Y3D3 137 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms