RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 STPG2Q8N412 459 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 SVOPQ8N4V2 548 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 FAM71E2Q8N5Q1 922 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 RNF152Q8N8N0 203 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 OR51D1Q8NGF3 324 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 OR10V1Q8NGI7 309 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 RCC1LQ96I51 464 aaKnown RBP9.35□□□□□ -0.91
VRK1-204ENST00000555351 S1PR3Q99500 378 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 GFI1Q99684 422 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 RASL11BQ9BPW5 248 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 GPR61Q9BZJ8 451 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 PLGRKTQ9HBL7 147 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 PLEKHJ1Q9NW61 149 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 STEAP1Q9UHE8 339 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 IGHV3-72A0A0B4J1Y9 119 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 TRAV1-2A0A0B4J238 106 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 A0A1W2PRX2 142 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 FOXI3A8MTJ6 420 aaPredicted RBP9.34□□□□□ -0.91
VRK1-204ENST00000555351 RRP9O43818 475 aaKnown RBP9.34□□□□□ -0.91
VRK1-204ENST00000555351 PF4P02776 101 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
VRK1-204ENST00000555351 PPP1CCP36873 323 aaKnown RBP9.34□□□□□ -0.91
VRK1-204ENST00000555351 GABARAPL2P60520 117 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 RPL23AP62750 156 aaKnown RBP9.34□□□□□ -0.91
VRK1-204ENST00000555351 RPS25P62851 125 aaKnown RBP9.34□□□□□ -0.91
VRK1-204ENST00000555351 FABP5Q01469 135 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 RAB11BQ15907 218 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 OXLD1Q5BKU9 147 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 FAM53AQ6NSI3 398 aaPredicted RBP9.34□□□□□ -0.91
VRK1-204ENST00000555351 TEX38Q6PEX7 206 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 CD200R1LQ6Q8B3 271 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 ODF3L1Q8IXM7 274 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 OR2AK2Q8NG84 335 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 OR56B1Q8NGI3 324 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 NICN1Q9BSH3 213 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 NECAP2Q9NVZ3 263 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 PIPOXQ9P0Z9 390 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 V9GY05 133 aa9.34□□□□□ -0.91
VRK1-204ENST00000555351 A0A0A6YYD4 124 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 PDCD5O14737 125 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 IGF1P05019 195 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 OR5H8P0DN80 308 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 SOX6P35712 828 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 FOXE3Q13461 319 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 GNMTQ14749 295 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 PNLIPRP3Q17RR3 467 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 C10orf99Q6UWK7 81 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 ZNF329Q86UD4 541 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 OR52L2PQ8NGH6 319 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 EDARADDQ8WWZ3 215 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 PHF21AQ96BD5 680 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 FAM3DQ96BQ1 224 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 CNBD2Q96M20 576 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 NOL4LQ96MY1 436 aaPredicted RBP9.33□□□□□ -0.92
VRK1-204ENST00000555351 NABP2Q9BQ15 211 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 CHMP1AQ9HD42 196 aaPredicted RBP9.33□□□□□ -0.92
VRK1-204ENST00000555351 C12orf4Q9NQ89 552 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 NDUFB11Q9NX14 153 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 AK6Q9Y3D8 172 aaKnown RBP9.33□□□□□ -0.92
VRK1-204ENST00000555351 TGP01266 2768 aa9.33□□□□□ -0.92
VRK1-204ENST00000555351 ZNF736B4DX44 427 aaPredicted RBP9.32□□□□□ -0.92
VRK1-204ENST00000555351 RAB29O14966 203 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 LDLRAD4O15165 306 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 SOCS1O15524 211 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 DIRAS3O95661 229 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 IGHG4P01861 327 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 ELANEP08246 267 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 MYCNOSP40205 109 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 MAP2K4P45985 399 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 THBS3P49746 956 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 TMEM50BP56557 158 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 P2RY14Q15391 338 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 C2orf76Q3KRA6 126 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 KHDC1LQ5JSQ8 128 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 LINC00482Q8N8I6 264 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 PTX4Q96A99 478 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 CENPOQ9BU64 300 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
VRK1-204ENST00000555351 YTHDF1Q9BYJ9 559 aaKnown RBP9.32□□□□□ -0.92
VRK1-204ENST00000555351 IFI27L2Q9H2X8 130 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 Q9H521 79 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 SLC23A1Q9UHI7 598 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 RAB22AQ9UL26 194 aa9.32□□□□□ -0.92
VRK1-204ENST00000555351 SAA2-SAA4A0A096LPE2 208 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 TRDV1A0A1B0GX56 115 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 OR5H14A6NHG9 310 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 DENRO43583 198 aaKnown RBP9.31□□□□□ -0.92
VRK1-204ENST00000555351 ATP6V1G2O95670 118 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 HLA-DRB1P01911 266 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 SAA2P0DJI9 122 aaPredicted RBP9.31□□□□□ -0.92
VRK1-204ENST00000555351 ZBTB25P24278 435 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 MC5RP33032 325 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 CDX1P47902 265 aaPredicted RBP9.31□□□□□ -0.92
VRK1-204ENST00000555351 SERPINB10P48595 397 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 F2RL1P55085 397 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 HLA-DRB3P79483 266 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 CFHR3Q02985 330 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 SSX1Q16384 188 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 CXorf66Q5JRM2 361 aaPredicted RBP9.31□□□□□ -0.92
VRK1-204ENST00000555351 UBE2UQ5VVX9 321 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms