RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 FAM185AQ8N0U4 392 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 BATF2Q8N1L9 274 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 NUDT10Q8NFP7 164 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 OR2M7Q8NG81 312 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 CORO2AQ92828 525 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 ABHD14BQ96IU4 210 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 DIRC2Q96SL1 478 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 PLA2G3Q9NZ20 509 aa10.46□□□□□ -0.73
SHMT2-207ENST00000553837 FAM221AA4D161 298 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF503-AS2A6NEH8 195 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 PFN1P07737 140 aaKnown RBP10.46□□□□□ -0.74
SHMT2-207ENST00000553837 JMJD7P0C870 316 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 BCL2P10415 239 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 LHX2P50458 406 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 DYNLT3P51808 116 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 SELENOTP62341 195 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF100Q8IYN0 542 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 SPIN2AQ99865 258 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 SPIN2BQ9BPZ2 258 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF703Q9H7S9 590 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-207ENST00000553837 DNAJC4Q9NNZ3 241 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 SLC7A10Q9NS82 523 aa10.46□□□□□ -0.74
SHMT2-207ENST00000553837 C20orf202A1L168 122 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 NKX2-6A6NCS4 301 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 DTYMKP23919 212 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 UCP3P55916 312 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 CLDN18P56856 261 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 TAS2R30P59541 319 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 PMS2P11Q13670 270 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 TEX38Q6PEX7 206 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 CALHM1Q8IU99 346 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM170AQ8WVE7 144 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 BORCS8Q96FH0 119 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 MED13Q9UHV7 2174 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 A0A096LPE4 126 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 A0A1W2PPZ6 126 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 ZFP92A6NM28 416 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 FAM166BA8MTA8 275 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 SCGB1D1O95968 90 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF883P0CG24 379 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 CCL2P13500 99 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 CD59P13987 128 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 MMP9P14780 707 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 FAM3BP58499 235 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-207ENST00000553837 CNN3Q15417 329 aaKnown RBP10.45□□□□□ -0.74
SHMT2-207ENST00000553837 OR8B8Q15620 311 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 COL5A1-AS1Q5SY13 56 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 PIGCQ92535 297 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 STRADBQ9C0K7 418 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 FGF23Q9GZV9 251 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-207ENST00000553837 FKBP11Q9NYL4 201 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 LAMP3Q9UQV4 416 aa10.45□□□□□ -0.74
SHMT2-207ENST00000553837 NKX6-3A6NJ46 265 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 SSSCA1O60232 199 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 CST7O76096 145 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 IRF2P14316 349 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 BMI1P35226 326 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 MAGEA5P43359 124 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 ARF1P84077 181 aaKnown RBP10.44□□□□□ -0.74
SHMT2-207ENST00000553837 RUNX1Q01196 453 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 OR5I1Q13606 314 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 P2RY6Q15077 328 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM241Q24JQ0 296 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 MPV17LQ2QL34 196 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 ACOT6Q3I5F7 207 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-207ENST00000553837 MEX3BQ6ZN04 569 aaKnown RBP10.44□□□□□ -0.74
SHMT2-207ENST00000553837 LHFPL2Q6ZUX7 228 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 TUSC5Q8IXB3 177 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 IL22RA1Q8N6P7 574 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM45BQ96B21 275 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 OR5B12Q96R08 314 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 ATP5SQ99766 215 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 MSL2Q9HCI7 577 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 BOKQ9UMX3 212 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-207ENST00000553837 BDP1A6H8Y1 2624 aa10.44□□□□□ -0.74
SHMT2-207ENST00000553837 IGKV3D-15A0A087WSY6 115 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 C3orf85A0A1B0GTC6 90 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 SP9P0CG40 484 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 NPBWR2P48146 333 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 C3AR1Q16581 482 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 PLCXD3Q63HM9 321 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 LINC00696Q6ZRV3 163 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM217Q8N7C4 229 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 SUMF1Q8NBK3 374 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 OR11L1Q8NGX0 322 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 TP53RKQ96S44 253 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 FAM173AQ9BQD7 235 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 C1QTNF5Q9BXJ0 243 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 PRRG4Q9BZD6 226 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 NAT8Q9UHE5 227 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF407Q9C0G0 2248 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 FRYQ5TBA9 3013 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 CDX4O14627 284 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-207ENST00000553837 MPPED1O15442 326 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 MRPL33O75394 65 aaKnown RBP10.43□□□□□ -0.74
SHMT2-207ENST00000553837 IFNA5P01569 189 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 HLA-HP01893 362 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 TUBG1P23258 451 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 OR10J1P30954 320 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 RPL29P47914 159 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms