RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 S1PR3Q99500 378 aa10.25□□□□□ -0.77
NPAS3-209ENST00000551008 ZNF251Q9BRH9 671 aa10.25□□□□□ -0.77
NPAS3-209ENST00000551008 ABHD14AQ9BUJ0 271 aa10.25□□□□□ -0.77
NPAS3-209ENST00000551008 MRPL20Q9BYC9 149 aaKnown RBP10.25□□□□□ -0.77
NPAS3-209ENST00000551008 ABCG5Q9H222 651 aa10.25□□□□□ -0.77
NPAS3-209ENST00000551008 IFI27L2Q9H2X8 130 aa10.25□□□□□ -0.77
NPAS3-209ENST00000551008 OR2S2Q9NQN1 319 aa10.25□□□□□ -0.77
NPAS3-209ENST00000551008 LIN7CQ9NUP9 197 aaKnown RBP10.25□□□□□ -0.77
NPAS3-209ENST00000551008 SERPINE3A8MV23 424 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 YPEL1O60688 119 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 MOSP00540 346 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 IL3RAP26951 378 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 CNTFRP26992 372 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 BLVRBP30043 206 aaPredicted RBP10.24□□□□□ -0.77
NPAS3-209ENST00000551008 OR3A3P47888 321 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 RPL23AP62750 156 aaKnown RBP10.24□□□□□ -0.77
NPAS3-209ENST00000551008 CFHR3Q02985 330 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 FOXB2Q5VYV0 432 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 LCNL1Q6ZST4 164 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 ZNF833PQ6ZTB9 187 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 OR2W3Q7Z3T1 314 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 NEDD4LQ96PU5 975 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 YPEL2Q96QA6 119 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 NABP2Q9BQ15 211 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 CCDC90BQ9GZT6 254 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 AURKAIP1Q9NWT8 199 aaPredicted RBP10.24□□□□□ -0.77
NPAS3-209ENST00000551008 AK3Q9UIJ7 227 aa10.24□□□□□ -0.77
NPAS3-209ENST00000551008 SAA2-SAA4A0A096LPE2 208 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 TRBV6-6A0A0A6YYG2 114 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 TXNL1O43396 289 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 SAA2P0DJI9 122 aaPredicted RBP10.23□□□□□ -0.77
NPAS3-209ENST00000551008 CALRP27797 417 aaKnown RBP10.23□□□□□ -0.77
NPAS3-209ENST00000551008 PLAC9Q5JTB6 97 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 CD200R1LQ6Q8B3 271 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 OR51D1Q8NGF3 324 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 CHPT1Q8WUD6 406 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 ACOT13Q9NPJ3 140 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 DNAH9Q9NYC9 4486 aa10.23□□□□□ -0.77
NPAS3-209ENST00000551008 IGKV1-6A0A0C4DH72 117 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 NCBP2LA6PVI3 153 aaKnown RBP10.22□□□□□ -0.77
NPAS3-209ENST00000551008 PROP1O75360 226 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 ATP6V1G2O95670 118 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 PF4V1P10720 104 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 SNRPBP14678 240 aaKnown RBP10.22□□□□□ -0.77
NPAS3-209ENST00000551008 OR10A3P58181 314 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 TRAM1Q15629 374 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 KHDC1LQ5JSQ8 128 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 C8orf86Q6ZUL3 223 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 ZNF367Q7RTV3 350 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 NR2C2APQ86WQ0 139 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
NPAS3-209ENST00000551008 RNF152Q8N8N0 203 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 GALMQ96C23 342 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 ARHGAP5-AS1Q96IT6 56 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 RAB9BQ9NP90 201 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 KCNIP1Q9NZI2 227 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 OR1A1Q9P1Q5 309 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 KCNK7Q9Y2U2 307 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 COL7A1Q02388 2944 aa10.22□□□□□ -0.77
NPAS3-209ENST00000551008 TMEM272A0A1B0GTI8 110 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 AP4M1O00189 453 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 ST8SIA5O15466 376 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 ARL6IP5O75915 188 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 ARSBP15848 533 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 CD33P20138 364 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 PSMA1P25786 263 aaKnown RBP10.21□□□□□ -0.77
NPAS3-209ENST00000551008 HSPA13P48723 471 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 THBS3P49746 956 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 KRTAP10-11P60412 298 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 RAB11BQ15907 218 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 C2orf76Q3KRA6 126 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 MOGAT2Q3SYC2 334 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 RPL39P5Q59GN2 51 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 FAM3DQ96BQ1 224 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 DUX3Q96PT4 197 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 P2RX4Q99571 388 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 AGMATQ9BSE5 352 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 PECRQ9BY49 303 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 PLGRKTQ9HBL7 147 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 Q9N2K0 584 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 NECAP2Q9NVZ3 263 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 NDUFB11Q9NX14 153 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 ZNF107Q9UII5 783 aaPredicted RBP10.21□□□□□ -0.77
NPAS3-209ENST00000551008 HSF4Q9ULV5 492 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 RAB26Q9ULW5 256 aa10.21□□□□□ -0.77
NPAS3-209ENST00000551008 A0A0B4J203 849 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 PF4P02776 101 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 RPLP1P05386 114 aaKnown RBP10.2□□□□□ -0.78
NPAS3-209ENST00000551008 SCTP09683 121 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 SLC2A2P11168 524 aaPredicted RBP10.2□□□□□ -0.78
NPAS3-209ENST00000551008 VEGFCP49767 419 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 ACTBP60709 375 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 HLA-DRB3P79483 266 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 NDPQ00604 133 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 HES5Q5TA89 166 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 MOB1BQ7L9L4 216 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 FOXRED2Q8IWF2 684 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 OR8H1Q8NGG4 311 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 IL1F10Q8WWZ1 152 aa10.2□□□□□ -0.78
NPAS3-209ENST00000551008 ABHD14BQ96IU4 210 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms