RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 H2AFB2P0C5Z0 115 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 C8orf88P0DMB2 117 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 PSG2P11465 335 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 CCL2P13500 99 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ZNF20P17024 532 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 VDAC2P45880 294 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 YAP1P46937 504 aaKnown RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ELLP55199 621 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ERVFRD-1P60508 538 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 SCGB2A2Q13296 93 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 C2orf83Q53S99 150 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 TMEM268Q5VZI3 342 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 HAGHLQ6PII5 290 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ZNF101Q8IZC7 436 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 JAGN1Q8N5M9 183 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 DEFB125Q8N687 156 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 OR11L1Q8NGX0 322 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 SLC25A36Q96CQ1 311 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 CMBLQ96DG6 245 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 SEC22AQ96IW7 307 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 EGLN1Q9GZT9 426 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 GAL3ST2Q9H3Q3 398 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ASCC3Q8N3C0 2202 aaKnown RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 CD5LO43866 347 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 HAND1O96004 215 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 S100A5P33763 92 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 GDNFP39905 211 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 LGALS7P47929 136 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 CCL11P51671 97 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 UBE2NP61088 152 aaKnown RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 MORN2Q502X0 79 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 SPANXN2Q5MJ10 180 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ATP1A1-AS1Q5TC04 95 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 CCDC71LQ8N9Z2 235 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 FGGYQ96C11 551 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 BSCL2Q96G97 398 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ODF3Q96PU9 254 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 C20orf85Q9H1P6 137 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 C5orf66Q9H5L9 145 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 NAA60Q9H7X0 242 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 CDH20Q9HBT6 801 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ZNF286AQ9HBT8 521 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 EXOSC4Q9NPD3 245 aaKnown RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 TAAR3PQ9P1P4 343 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 LSM4Q9Y4Z0 139 aaKnown RBP3.96□□□□□ -1.78
SCAF11-212ENST00000549162 WSB1Q9Y6I7 421 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ZNF292O60281 2723 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 SPRY2O43597 315 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 HPGDSO60760 199 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 SCGB2A1O75556 95 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 HLA-DRB1P01911 266 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 CD79AP11912 226 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 OR3A4PP47883 348 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 RAB5CP51148 216 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 STEAP1BQ6NZ63 245 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 TTC9CQ8N5M4 171 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 TMED6Q8WW62 240 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 TMEM106BQ9NUM4 274 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 C19orf73Q9NVV2 129 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 AK3Q9UIJ7 227 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 TNFSF18Q9UNG2 199 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 CBY3A6NI87 242 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 M0QZK8 103 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 EEF1B2P24534 225 aaKnown RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 SAMD13Q5VXD3 122 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 UQCC3Q6UW78 93 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 GLIPR1L1Q6UWM5 242 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 CENPSQ8N2Z9 138 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 ZNF676Q8N7Q3 588 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 OR10Q1Q8NGQ4 319 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 CDC26Q8NHZ8 85 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 CACNG8Q8WXS5 425 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 RAB3CQ96E17 227 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 MALSU1Q96EH3 234 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 TPPP3Q9BW30 176 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 KCNJ16Q9NPI9 418 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 C9orf170A2RU37 121 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 TRIM77I1YAP6 450 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 OR2H2O95918 312 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 CRYAAP02489 173 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 B4GALT1P15291 398 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 FOXG1P55316 489 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 DLK1P80370 383 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 SSBP2P81877 361 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 GAGE13Q4V321 117 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 TMED4Q7Z7H5 227 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 ANGPTL5Q86XS5 388 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 MCEMP1Q8IX19 187 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 RNASEH2CQ8TDP1 164 aaKnown RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 VN1R17PQ8TDU5 208 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 MUCL1Q96DR8 90 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 NEU1Q99519 415 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 ASCL2Q99929 193 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 PDCD1LG2Q9BQ51 273 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 OPN3Q9H1Y3 402 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 FKBP11Q9NYL4 201 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 TMEM14CQ9P0S9 112 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 A0A0D9SG52 128 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 LRRC30A6NM36 301 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 L7N2F9 121 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms