RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 GMDSO60547 372 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 SMIM24O75264 130 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 GCM2O75603 506 aaPredicted RBP2.46□□□□□ -2.02
PTCH1-216ENST00000548379 LYZL6O75951 148 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 CD8AP01732 235 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 HLA-DPB1P04440 258 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 BCHEP06276 602 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 KRT16P08779 473 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 RBP1P09455 135 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 IGHV1-8P0DP01 117 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 IGFBP3P17936 291 aaPredicted RBP2.46□□□□□ -2.02
PTCH1-216ENST00000548379 ELK4P28324 431 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 CSNK1A1P48729 337 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF83P51522 516 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 ERCC8Q13216 396 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 NAB1Q13506 487 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 GINS1Q14691 196 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 QPRTQ15274 297 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 GUSBP1Q15486 140 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 TSC22D1Q15714 1073 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 GABRA6Q16445 453 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 TRMT5Q32P41 509 aaKnown RBP2.46□□□□□ -2.02
PTCH1-216ENST00000548379 SPIN4Q56A73 249 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 STEAP4Q687X5 459 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 ERICH5Q6P6B1 374 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 CEMP1Q6PRD7 247 aaPredicted RBP2.46□□□□□ -2.02
PTCH1-216ENST00000548379 NTM-AS1Q6ZSK4 140 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 Q6ZT83 130 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 C3orf62Q6ZUJ4 267 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 SLC35D2Q76EJ3 337 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 RBM45Q8IUH3 476 aaKnown RBP2.46□□□□□ -2.02
PTCH1-216ENST00000548379 CBLN2Q8IUK8 224 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 ATP6V1C2Q8NEY4 427 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 OR10G2Q8NGC3 310 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 OR9A2Q8NGT5 310 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 CDC26Q8NHZ8 85 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 TCP10LQ8TDR4 215 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 C10orf105Q8TEF2 133 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 ABHD3Q8WU67 409 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 ZHX1-C8orf76Q96EF9 292 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 CHMP6Q96FZ7 201 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 RNF145Q96MT1 663 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 GPR22Q99680 433 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 CHID1Q9BWS9 393 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 HINT2Q9BX68 163 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 VPS29Q9UBQ0 182 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 RNF11Q9Y3C5 154 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 MED13Q9UHV7 2174 aa2.46□□□□□ -2.02
PTCH1-216ENST00000548379 MTORP42345 2549 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 PCNX1Q96RV3 2341 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 IGLV3-32A0A0A0MS00 114 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 A0A0J9YW62 118 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 A0A1B0GW55 424 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 RAB19A4D1S5 217 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 A6NDN8 102 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 OR5H1A6NKK0 313 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 NCBP2LA6PVI3 153 aaKnown RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 B4DSR2 109 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 E7EQL1 145 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 GPR171O14626 319 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 XRCC2O43543 280 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 FADS1O60427 444 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 SPAG7O75391 227 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 MRPL33O75394 65 aaKnown RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 GABARAPO95166 117 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 KLHL2O95198 593 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 PDYNP01213 254 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 HBE1P02100 147 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 IL3P08700 152 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 DUX4L2P0CJ85 424 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 DUX4L3P0CJ86 424 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 DUX4L5P0CJ88 424 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 DUX4L6P0CJ89 424 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 DUX4L7P0CJ90 424 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF32P17041 273 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 TCP1P17987 556 aaKnown RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 TAC1P20366 129 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 GABRA3P34903 492 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 PHBP35232 272 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 KCNJ3P48549 501 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 SERPINB8P50452 374 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 ESRRGP62508 458 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 C2orf80Q0P641 193 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 RGNQ15493 299 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 UAP1Q16222 522 aaPredicted RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 IMPG1Q17R60 797 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 TMEM176BQ3YBM2 270 aaPredicted RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 Q5W150 140 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 FBXW9Q5XUX1 488 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 LINC00336Q6ZUF6 198 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 ABHD12BQ7Z5M8 362 aaPredicted RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 MTERF4Q7Z6M4 381 aaKnown RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 C17orf78Q8N4C9 275 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 CDRT4Q8N9R6 151 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 OR10AD1Q8NGE0 317 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 CLHC1Q8NHS4 586 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 SUN5Q8TC36 379 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 TM4SF18Q96CE8 201 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 ARL5BQ96KC2 179 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 MAP1LC3CQ9BXW4 147 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms