RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TNFRSF9Q07011 255 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 ZNF774Q6NX45 483 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 SARAFQ96BY9 339 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 TRAV14DV4A0A0A6YYC5 116 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 A0A1W2PPC4 97 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 GNG10P50151 68 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 OR1D5P58170 312 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 HEPN1Q6WQI6 88 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 BATF2Q8N1L9 274 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 ALKBH7Q9BT30 221 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-212ENST00000546744 SHISA3A0PJX4 238 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 COLCA2A8K830 154 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 MPZL1O95297 269 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 PSMB2P49721 201 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 NUTF2P61970 127 aaKnown RBP11.14□□□□□ -0.63
PTCH1-212ENST00000546744 KCNMB1Q16558 191 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 MYOZ3Q8TDC0 251 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 A0A1W2PPV9 198 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 RAB29O14966 203 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 COL9A2Q14055 689 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-212ENST00000546744 C1QL3Q5VWW1 255 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 GPBAR1Q8TDU6 330 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 KISS1RQ969F8 398 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-212ENST00000546744 SOX21Q9Y651 276 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-212ENST00000546744 CD5P06127 495 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 TNFRSF1AP19438 455 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTCH1-212ENST00000546744 FAM206AQ9NX38 181 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 LAMTOR2Q9Y2Q5 125 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 KLHDC2Q9Y2U9 406 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 TNFSF11O14788 317 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 TMEM187Q14656 261 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 SAXO1Q8IYX7 474 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 PATE1Q8WXA2 126 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 REG4Q9BYZ8 158 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 SDF2L1Q9HCN8 221 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 IL36GQ9NZH8 169 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 ATP23Q9Y6H3 246 aa11.14□□□□□ -0.63
PTCH1-212ENST00000546744 LRRC75AQ8NAA5 344 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 WNT2BQ93097 391 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 PRDM13Q9H4Q3 707 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 COX6CP09669 75 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 BMI1P35226 326 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 MPLP40238 635 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 SRSF5Q13243 272 aaKnown RBP11.13□□□□□ -0.63
PTCH1-212ENST00000546744 PNKDQ8N490 385 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 RNF122Q9H9V4 155 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 ZNF355PQ9NSJ1 428 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 IGLV1-36A0A0B4J1U3 117 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 NDUFS8O00217 210 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 IGHV3-9P01782 118 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 SFTPCP11686 197 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-212ENST00000546744 LINC01590Q5TEZ4 76 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 RARRES2Q99969 163 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 CLN8Q9UBY8 286 aa11.13□□□□□ -0.63
PTCH1-212ENST00000546744 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-212ENST00000546744 TRBV6-7A0A0A0MS04 114 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 DLEU1O43261 78 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 CISD3P0C7P0 127 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 C1orf174Q8IYL3 243 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 CCL4L1Q8NHW4 92 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 TIMD4Q96H15 378 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 ZPBPQ9BS86 351 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 NCOR1P1Q9H4R4 102 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 PXMP4Q9Y6I8 212 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 hADV38S2A0JD32 116 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 EML2O95834 649 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 CSN3P07498 182 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 POU2F2P09086 479 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 MDKP21741 143 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-212ENST00000546744 FGF12P61328 243 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 FUT5Q11128 374 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 OR8I2Q8N0Y5 310 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 IMMP2LQ96T52 175 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 A0A096LPE4 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 A0A1W2PPZ6 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 TWIST1Q15672 202 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 C10orf113Q5VZT2 155 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 TMEM136Q6ZRR5 245 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-212ENST00000546744 MMD2Q8IY49 270 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 H0Y8X5 98 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 PSG2P11465 335 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 EDN3P14138 238 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-212ENST00000546744 FAM27BQ5VT28 67 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 Q8WTZ3 238 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 GTF3AQ92664 365 aaKnown RBP11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms