RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 LIN7CQ9NUP9 197 aaKnown RBP12.15□□□□□ -0.46
SSH1-204ENST00000546697 TMEM272A0A1B0GTI8 110 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 RAB27BO00194 218 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 RAB3BP20337 219 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 GNMTQ14749 295 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 SRSF7Q16629 238 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSH1-204ENST00000546697 TPRA1Q86W33 373 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 FAM71E2Q8N5Q1 922 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 Q8N9W7 124 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 OR52L2PQ8NGH6 319 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 ZNF251Q9BRH9 671 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 PECRQ9BY49 303 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 ABCG5Q9H222 651 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 IFI27L2Q9H2X8 130 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 Q9N2K0 584 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSH1-204ENST00000546697 TXNL4BQ9NX01 149 aaKnown RBP12.14□□□□□ -0.47
SSH1-204ENST00000546697 AK3Q9UIJ7 227 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 KCNK7Q9Y2U2 307 aa12.14□□□□□ -0.47
SSH1-204ENST00000546697 RRP15Q9Y3B9 282 aaKnown RBP12.14□□□□□ -0.47
SSH1-204ENST00000546697 WIPF1O43516 503 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 MOSP00540 346 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 MYL9P24844 172 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 CLDN12P56749 244 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 OR10A3P58181 314 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 LSAMPQ13449 338 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 KPRPQ5T749 579 aaPredicted RBP12.13□□□□□ -0.47
SSH1-204ENST00000546697 Q6ZS49 121 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 OR5AU1Q8NGC0 362 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 OR10V1Q8NGI7 309 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 ARHGAP5-AS1Q96IT6 56 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
SSH1-204ENST00000546697 ABRACLQ9P1F3 81 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 STUB1Q9UNE7 303 aa12.13□□□□□ -0.47
SSH1-204ENST00000546697 MFNGO00587 321 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 PPP1CCP36873 323 aaKnown RBP12.12□□□□□ -0.47
SSH1-204ENST00000546697 REG1BP48304 166 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 VEGFCP49767 419 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 HLA-DRB3P79483 266 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 PLA2G7Q13093 441 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 C22orf42Q6IC83 251 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 C5orf24Q7Z6I8 188 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 MOB3BQ86TA1 216 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 PRR18Q8N4B5 295 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 WFDC9Q8NEX5 89 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 NABP2Q9BQ15 211 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 SLC23A1Q9UHI7 598 aa12.12□□□□□ -0.47
SSH1-204ENST00000546697 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 SERPINE3A8MV23 424 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 ZNF736B4DX44 427 aaPredicted RBP12.11□□□□□ -0.47
SSH1-204ENST00000546697 TMEM127O75204 238 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 PEX14O75381 377 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 PSMB9P28065 219 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 SCAND1P57086 179 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 HES1Q14469 280 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 HES5Q5TA89 166 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 RNF152Q8N8N0 203 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 C11orf44Q8N8P7 122 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 OR2AK2Q8NG84 335 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 OR4F17Q8NGA8 305 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 OR10R2Q8NGX6 335 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 CHPT1Q8WUD6 406 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 OR4F4Q96R69 305 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 S1PR3Q99500 378 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
SSH1-204ENST00000546697 TSSC4Q9Y5U2 329 aaPredicted RBP12.11□□□□□ -0.47
SSH1-204ENST00000546697 SAA2-SAA4A0A096LPE2 208 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 IGKV1-6A0A0C4DH72 117 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 RAB29O14966 203 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 IGF1P05019 195 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 SAA2P0DJI9 122 aaPredicted RBP12.1□□□□□ -0.47
SSH1-204ENST00000546697 ZBTB25P24278 435 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 SLC6A1P30531 599 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 ARL6IP1Q15041 203 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 SAMD5Q5TGI4 173 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 CENPVQ7Z7K6 275 aaPredicted RBP12.1□□□□□ -0.47
SSH1-204ENST00000546697 LYG1Q8N1E2 194 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 NPBQ8NG41 125 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 EDARADDQ8WWZ3 215 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 RAB3CQ96E17 227 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
SSH1-204ENST00000546697 CHCHD6Q9BRQ6 235 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 HDHD3Q9BSH5 251 aaPredicted RBP12.1□□□□□ -0.47
SSH1-204ENST00000546697 CABLES2Q9BTV7 478 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 GAB2Q9UQC2 676 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
SSH1-204ENST00000546697 IGHV3-72A0A0B4J1Y9 119 aa12.09□□□□□ -0.47
SSH1-204ENST00000546697 SH2D7A6NKC9 451 aaPredicted RBP12.09□□□□□ -0.47
SSH1-204ENST00000546697 TRIM64CA6NLI5 447 aa12.09□□□□□ -0.47
SSH1-204ENST00000546697 TRDCB7Z8K6 153 aa12.09□□□□□ -0.47
SSH1-204ENST00000546697 KCNAB3O43448 404 aa12.09□□□□□ -0.47
SSH1-204ENST00000546697 RRP9O43818 475 aaKnown RBP12.09□□□□□ -0.47
SSH1-204ENST00000546697 PROP1O75360 226 aa12.09□□□□□ -0.47
SSH1-204ENST00000546697 NDUFA3O95167 84 aa12.09□□□□□ -0.47
SSH1-204ENST00000546697 HIST1H1DP16402 221 aaKnown RBP12.09□□□□□ -0.47
SSH1-204ENST00000546697 GPR12P47775 334 aa12.09□□□□□ -0.47
SSH1-204ENST00000546697 SERPINB10P48595 397 aa12.09□□□□□ -0.47
SSH1-204ENST00000546697 CFHR3Q02985 330 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms