RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 KBTBD11-OT1A0A1B0GTJ5 212 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 H0Y980 276 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 SOX15O60248 233 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 HSPB1P04792 205 aaKnown RBP11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 OCM2P0CE71 109 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 OCMP0CE72 109 aaPredicted RBP11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 CGB3P0DN86 165 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 CGB7P0DN87 165 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 CPEP16870 476 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 PRKACBP22694 351 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 RANBP1P43487 201 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 ODF4Q2M2E3 257 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 Q499Y3 187 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 TMEM104Q8NE00 496 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 OR10X1Q8NGY0 326 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 SPSB1Q96BD6 273 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 PDCD1LG2Q9BQ51 273 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 CHST5Q9GZS9 411 aa11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 MRPS28Q9Y2Q9 187 aaKnown RBP11.65□□□□□ -0.54
CLSTN3-216ENST00000545663 TRAV41A0A0B4J266 112 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 ZNF729A6NN14 1252 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 OR2H2O95918 312 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 MOSP00540 346 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 LALBAP00709 142 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 GAPDHP04406 335 aaKnown RBP11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 TFAP2AP05549 437 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 BCL3P20749 454 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 GALP22466 123 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 ZNF816Q0VGE8 651 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 ZNF146Q15072 292 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 RDH10Q8IZV5 341 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 FAM58AQ8N1B3 248 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 PARP16Q8N5Y8 322 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 MINDY2Q8NBR6 621 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 DNAAF1Q8NEP3 725 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 RFESDQ8TAC1 157 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 RGP1Q92546 391 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 TMEM106AQ96A25 262 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 PGLYRP3Q96LB9 341 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 PARP11Q9NR21 331 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 FBXO7Q9Y3I1 522 aa11.64□□□□□ -0.55
CLSTN3-216ENST00000545663 MAGEB3O15480 346 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 PRKACAP17612 351 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 MAP2K4P45985 399 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 FUT6P51993 359 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 CD81P60033 236 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 PPP3R1P63098 170 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 KRBOX4Q5JUW0 171 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 SYT6Q5T7P8 510 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 XAF1Q6GPH4 301 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 FGGYQ96C11 551 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 ZCCHC4Q9H5U6 513 aa11.63□□□□□ -0.55
CLSTN3-216ENST00000545663 TRBV5-5A0A0J9YX44 114 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 FUOMA2VDF0 154 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 ARL6IP5O75915 188 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 CD7P09564 240 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 PSMB9P28065 219 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 SCN1BQ07699 218 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 ATXN7L3Q14CW9 347 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 UBE2V2Q15819 145 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 TIMM50Q3ZCQ8 353 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 LINC00336Q6ZUF6 198 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 OPALINQ96PE5 141 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 NEURL2Q9BR09 285 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 SRD5A3Q9H8P0 318 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 CALYQ9NYX4 217 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 IDI2-AS1Q9NZ38 188 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 GSTK1Q9Y2Q3 226 aa11.62□□□□□ -0.55
CLSTN3-216ENST00000545663 GPX5O75715 221 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 TPPPO94811 219 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 ATF1P18846 271 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 RAB3AP20336 220 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 CD1BP29016 333 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 BLVRBP30043 206 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 RBP2P50120 134 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 ZFP41Q8N8Y5 198 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 OR13A1Q8NGR1 328 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 BORCS8Q96FH0 119 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 MRPS26Q9BYN8 205 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 NDUFB11Q9NX14 153 aa11.61□□□□□ -0.55
CLSTN3-216ENST00000545663 PNMA8CA0A1B0GUJ8 204 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 SH2D1BO14796 132 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 SULT1B1O43704 296 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 CYB5AP00167 134 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 GLP1RP43220 463 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 ATP1B3P54709 279 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 NEDD8Q15843 81 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 ACSM3Q53FZ2 586 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 LCN12Q6JVE5 192 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 ZNF575Q86XF7 245 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 CDH26Q8IXH8 852 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 OR8H1Q8NGG4 311 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 OR51A4Q8NGJ6 313 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 ADAT3Q96EY9 351 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 RITA1Q96K30 269 aa11.6□□□□□ -0.55
CLSTN3-216ENST00000545663 MS4A10Q96PG2 267 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms