RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TNFRSF1A	P19438	455 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	TBP	P20226	339 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	TNFSF4	P23510	183 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	FPR2	P25090	351 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	PSMB6	P28072	239 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	MDH2	P40926	338 aa	Known RBP	5.3	□□□□□ -1.56
CIT-213	ENST00000543324	CD200	P41217	278 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	CENPA	P49450	140 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	SULT1A2	P50226	295 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	ATP1B3	P54709	279 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	CLDN12	P56749	244 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	TAS2R31	P59538	309 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	RAB2A	P61019	212 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	LCN2	P80188	198 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	GUCA2A	Q02747	115 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	PAX8	Q06710	450 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	EGR3	Q06889	387 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	FABP9	Q0Z7S8	132 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	ZNF154	Q13106	437 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	LINC01590	Q5TEZ4	76 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	OR10K2	Q6IF99	312 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	PRSS54	Q6PEW0	395 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	BTNL8	Q6UX41	500 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	ZNF841	Q6ZN19	808 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	SLC16A9	Q7RTY1	509 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	FAM220A	Q7Z4H9	259 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	ZFP82	Q8N141	532 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	PNLDC1	Q8NA58	520 aa	Known RBP	5.3	□□□□□ -1.56
CIT-213	ENST00000543324	OR2Z1	Q8NG97	314 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	OR10AD1	Q8NGE0	317 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	OR13C8	Q8NGS7	320 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	OR4K13	Q8NH42	304 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	OR5AK2	Q8NH90	309 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	ST7L	Q8TDW4	575 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	SPSB4	Q96A44	273 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.3	□□□□□ -1.56
CIT-213	ENST00000543324	AQP10	Q96PS8	301 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	PHB2	Q99623	299 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	PRDM13	Q9H4Q3	707 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	PARP11	Q9NR21	331 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	DNAJB11	Q9UBS4	358 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	GHRL	Q9UBU3	117 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	CACFD1	Q9UGQ2	172 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	ZNF230	Q9UIE0	474 aa	Predicted RBP	5.3	□□□□□ -1.56
CIT-213	ENST00000543324	PPP1R3C	Q9UQK1	317 aa		5.3	□□□□□ -1.56
CIT-213	ENST00000543324	NOP16	Q9Y3C1	178 aa	Known RBP	5.3	□□□□□ -1.56
CIT-213	ENST00000543324	TRAV18	A0A075B6X5	111 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	WI2-2373I1.2	A0A1W2PRP0	233 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	OR4C45	A6NMZ5	311 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	LDLRAD4	O15165	306 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	NDUFS6	O75380	124 aa	Known RBP	5.29	□□□□□ -1.56
CIT-213	ENST00000543324	FCN3	O75636	299 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	JTB	O76095	146 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	DUS4L	O95620	317 aa	Known RBP	5.29	□□□□□ -1.56
CIT-213	ENST00000543324	REN	P00797	406 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	HLA-A	P01891	365 aa	Known RBP	5.29	□□□□□ -1.56
CIT-213	ENST00000543324	AMY2A	P04746	511 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	FCGR3A	P08637	254 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	HOXB5	P09067	269 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	SFTA3	P0C7M3	94 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	SELL	P14151	372 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	FST	P19883	344 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	RAB6A	P20340	208 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	HOXA5	P20719	270 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	NFYB	P25208	207 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	PSMB10	P40306	273 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	POU3F4	P49335	361 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	F2RL1	P55085	397 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	SRSF3	P84103	164 aa	Known RBP	5.29	□□□□□ -1.56
CIT-213	ENST00000543324	TAF13	Q15543	124 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	RAB11B	Q15907	218 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	ZNF124	Q15973	351 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	SNAI3	Q3KNW1	292 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	ZFAND6	Q6FIF0	208 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	OR2T2	Q6IF00	324 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	LINC00346	Q8IVM7	164 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	OR5AS1	Q8N127	324 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	CYB561A3	Q8NBI2	242 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	OR52E2	Q8NGJ4	325 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	OR5L1	Q8NGL2	311 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	OR13G1	Q8NGZ3	307 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	ERGIC1	Q969X5	290 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	SEH1L	Q96EE3	360 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	ZNF48	Q96MX3	618 aa	Predicted RBP	5.29	□□□□□ -1.56
CIT-213	ENST00000543324	NUDT16L1	Q9BRJ7	211 aa	Known RBP	5.29	□□□□□ -1.56
CIT-213	ENST00000543324	COMMD4	Q9H0A8	199 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	SMDT1	Q9H4I9	107 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	C7orf69	Q9H7B7	122 aa		5.29	□□□□□ -1.56
CIT-213	ENST00000543324	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.29	□□□□□ -1.56
CIT-213	ENST00000543324	IGHV2-70D	A0A0C4DH43	119 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324		A0A1B0GW64	132 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324		A0A1W2PPE3	182 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324		M0R135	149 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324	SCGN	O76038	276 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324	CYB5A	P00167	134 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324	IFNA17	P01571	189 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324	GAPDH	P04406	335 aa	Known RBP	5.28	□□□□□ -1.56
CIT-213	ENST00000543324	GYPB	P06028	91 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324	MED14OS	P0DP75	135 aa		5.28	□□□□□ -1.56
CIT-213	ENST00000543324	PGAM2	P15259	253 aa		5.28	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms