RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 FAM53AQ6NSI3 398 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR2W3Q7Z3T1 314 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CENPVQ7Z7K6 275 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MOB3BQ86TA1 216 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 FAM89BQ8N5H3 189 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR56B4Q8NH76 319 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR1L1Q8NH94 360 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MRPL30Q8TCC3 161 aaKnown RBP7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 DYNC2LI1Q8TCX1 351 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 WIPF2Q8TF74 440 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 GFI1Q99684 422 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SULT4A1Q9BR01 284 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 URM1Q9BTM9 101 aaKnown RBP7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TAF9BQ9HBM6 251 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MBNL3Q9NUK0 354 aaKnown RBP7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 GNG12Q9UBI6 72 aa7.76□□□□□ -1.17
TNFRSF1A-214ENST00000543048 NOTCH3Q9UM47 2321 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TRAV1-2A0A0B4J238 106 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 IGHV1-3A0A0C4DH29 117 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 PDCD5O14737 125 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 HSD17B6O14756 317 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TSPAN15O95858 294 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 AMY1AP04745 511 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 AMY2AP04746 511 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 LPLP06858 475 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CD28P10747 220 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TMEM11P17152 192 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SDC2P34741 201 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 HTD2P86397 168 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 EBI3Q14213 229 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 HNF4GQ14541 408 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 C2orf76Q3KRA6 126 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MORN2Q502X0 79 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 FBLN7Q53RD9 439 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CT45A1Q5HYN5 189 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 C9orf152Q5JTZ5 239 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 LY6G6FQ5SQ64 297 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SLC25A48Q6ZT89 311 aaKnown RBP7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 C6orf201Q7Z4U5 140 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TPRA1Q86W33 373 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 PRR18Q8N4B5 295 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR5AU1Q8NGC0 362 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR10V1Q8NGI7 309 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CT45A3Q8NHU0 189 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 ST6GALNAC6Q969X2 333 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 NICN1Q9BSH3 213 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 RIMS4Q9H426 269 aaPredicted RBP7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 KCNK15Q9H427 330 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR2S2Q9NQN1 319 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 PLEKHJ1Q9NW61 149 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MOB4Q9Y3A3 225 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 V9GY05 133 aa7.75□□□□□ -1.17
TNFRSF1A-214ENST00000543048 A0A0A6YYD4 124 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SHISA3A0PJX4 238 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SH2D7A6NKC9 451 aaPredicted RBP7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SLC31A2O15432 143 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SOCS1O15524 211 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 FGF16O43320 207 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 YPEL1O60688 119 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 RGS11O94810 467 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 IGKV1D-33P01593 117 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 IGKV1-33P01594 117 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CD1BP29016 333 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SOX6P35712 828 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 RPS19P39019 145 aaKnown RBP7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 REG1BP48304 166 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MXD1Q05195 221 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 NSUN5P1Q3KNT7 163 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TMEM95Q3KNT9 176 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 HIST2H2BDQ6DRA6 164 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 ZNF880Q6PDB4 577 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 C5orf24Q7Z6I8 188 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 NDUFA11Q86Y39 141 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 ZNF439Q8NDP4 499 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR51D1Q8NGF3 324 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR52L2PQ8NGH6 319 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR2T10Q8NGZ9 312 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 RTN4IP1Q8WWV3 396 aaPredicted RBP7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SLC25A46Q96AG3 418 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 FAM3DQ96BQ1 224 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 GALMQ96C23 342 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CYYR1Q96J86 154 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 EAF1Q96JC9 268 aaPredicted RBP7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 YPEL2Q96QA6 119 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 LPAR5Q9H1C0 372 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 ABRACLQ9P1F3 81 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 RAB22AQ9UL26 194 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 HSF4Q9ULV5 492 aa7.74□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TRBV6-6A0A0A6YYG2 114 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TXNL1O43396 289 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 NAPSAO96009 420 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CLEC2LP0C7M8 214 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 RAB3BP20337 219 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 VEGFCP49767 419 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 RORCP51449 518 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 ZNF137PP52743 207 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TMEM50BP56557 158 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CLDN12P56749 244 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CD83Q01151 205 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 HES5Q5TA89 166 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms