RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 AGAP20933 346 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 AESQ08117 197 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 PSG7Q13046 419 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 RNPS1Q15287 305 aaKnown RBP11.87□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF766Q5HY98 468 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 RFESDQ8TAC1 157 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 DCTN5Q9BTE1 182 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 MPC1Q9Y5U8 109 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 CLEC18AA5D8T8 446 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 NKX2-8O15522 239 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 OR8U8P0C7N1 319 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF806P0C7X5 589 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 RD3LP0DJH9 198 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 MDKP21741 143 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-210ENST00000539599 TAGLN2P37802 199 aaKnown RBP11.86□□□□□ -0.51
UBE3B-210ENST00000539599 RPS10P46783 165 aaKnown RBP11.86□□□□□ -0.51
UBE3B-210ENST00000539599 RPL23AP62750 156 aaKnown RBP11.86□□□□□ -0.51
UBE3B-210ENST00000539599 RPL30P62888 115 aaKnown RBP11.86□□□□□ -0.51
UBE3B-210ENST00000539599 DLK1P80370 383 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 DRAM1Q8N682 238 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 CLEC18CQ8NCF0 446 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 OR1J1Q8NGS3 322 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 GPR87Q9BY21 358 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 TGIF2-C20orf24A0A0A6YYL0 155 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 OR5B21A6NL26 309 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 KLRC4-KLRK1H3BQV0 150 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 YIF1AO95070 293 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 KRASP01116 189 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 FOLR2P14207 255 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 OR3A1P47881 315 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF880Q6PDB4 577 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF429Q86V71 674 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 STX12Q86Y82 276 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 COMMD1Q8N668 190 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 CLDND2Q8NHS1 167 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 MSL2Q9HCI7 577 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 PSENENQ9NZ42 101 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 WSB1Q9Y6I7 421 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 RELNP78509 3460 aa11.86□□□□□ -0.51
UBE3B-210ENST00000539599 ROS1P08922 2347 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 COL8A2P25067 703 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 G6PCP35575 357 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 SOX8P57073 446 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 ERVFRD-1P60508 538 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 UBE2KP61086 200 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 HMGN3Q15651 99 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF497Q6ZNH5 498 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 TRIB1Q96RU8 372 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 OBP2BQ9NPH6 170 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 KLF13Q9Y2Y9 288 aaPredicted RBP11.85□□□□□ -0.51
UBE3B-210ENST00000539599 C21orf140B9A014 251 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 SYNGR2O43760 224 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 CTXN2P0C2S0 81 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 CCL11P51671 97 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 TAS2R30P59541 319 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 RAB11AP62491 216 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 TBC1D28Q2M2D7 210 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 VWA1Q6PCB0 445 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 Q8WTZ3 238 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 CABLES2Q9BTV7 478 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 PLK3Q9H4B4 646 aa11.85□□□□□ -0.51
UBE3B-210ENST00000539599 UBE2L5PA0A1B0GUS4 154 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 MLNRO43193 412 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 RTL8AQ9BWD3 113 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 OR2D2Q9H210 308 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 CD46P15529 392 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 BMP5P22003 454 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 SSTR5P35346 364 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 PDZD11Q5EBL8 140 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF561Q8N587 486 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 MRGPRDQ8TDS7 321 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 ZDHHC16Q969W1 377 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 SSX3Q99909 188 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 TMPRSS5Q9H3S3 457 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 CDH20Q9HBT6 801 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 KIAA1456Q9P272 454 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 CLN8Q9UBY8 286 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 FABP6P51161 128 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 FOXF2Q12947 444 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 RHEBQ15382 184 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 SRSF7Q16629 238 aaKnown RBP eCLIP11.84□□□□□ -0.51
UBE3B-210ENST00000539599 CDPF1Q6NVV7 123 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 LILRB2Q8N423 598 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 FGFRL1Q8N441 504 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF525Q8N782 197 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 GTF3AQ92664 365 aaKnown RBP11.84□□□□□ -0.51
UBE3B-210ENST00000539599 MUCL1Q96DR8 90 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 ABHD14BQ96IU4 210 aa11.84□□□□□ -0.51
UBE3B-210ENST00000539599 CLN5O75503 358 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 IGKV1D-33P01593 117 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 IGKV1-33P01594 117 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 WT1P19544 449 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-210ENST00000539599 UBE2NP61088 152 aaKnown RBP11.83□□□□□ -0.52
UBE3B-210ENST00000539599 ERVK11-1P61568 191 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 SP5Q6BEB4 398 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-210ENST00000539599 LFNGQ8NES3 379 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 YPEL4Q96NS1 127 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 C12orf77C9JDV5 145 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms