RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 AK6Q9Y3D8 172 aaKnown RBP9.16□□□□□ -0.94
RTN3-209ENST00000538995 V9GY05 133 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 NOTCH3Q9UM47 2321 aa9.16□□□□□ -0.94
RTN3-209ENST00000538995 TRAV1-2A0A0B4J238 106 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 FOXI3A8MTJ6 420 aaPredicted RBP9.15□□□□□ -0.94
RTN3-209ENST00000538995 PDCD5O14737 125 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 PF4V1P10720 104 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 PPP1CCP36873 323 aaKnown RBP9.15□□□□□ -0.94
RTN3-209ENST00000538995 LSAMPQ13449 338 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 GNMTQ14749 295 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 SSX1Q16384 188 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 BEAN1Q3B7T3 259 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 FAM71F2Q6NXP2 309 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 Q8N9W7 124 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 OR2AK2Q8NG84 335 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 OR52L2PQ8NGH6 319 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 FAM3DQ96BQ1 224 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 CYYR1Q96J86 154 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 ABCG5Q9H222 651 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 CHMP1AQ9HD42 196 aaPredicted RBP9.15□□□□□ -0.94
RTN3-209ENST00000538995 C12orf4Q9NQ89 552 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 STEAP1Q9UHE8 339 aa9.15□□□□□ -0.94
RTN3-209ENST00000538995 TRDV1A0A1B0GX56 115 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 NCBP2LA6PVI3 153 aaKnown RBP9.14□□□□□ -0.95
RTN3-209ENST00000538995 SERPINE3A8MV23 424 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 G3V4G9 280 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 AP4M1O00189 453 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 ITGB1BP1O14713 200 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 LDLRAD4O15165 306 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 DENRO43583 198 aaKnown RBP9.14□□□□□ -0.95
RTN3-209ENST00000538995 MYL9P24844 172 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 SLC6A1P30531 599 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 GPR12P47775 334 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 SLC35B1P78383 322 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 UBE2UQ5VVX9 321 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 ZNF833PQ6ZTB9 187 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 C1QL4Q86Z23 238 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 ODF3L1Q8IXM7 274 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 FAM71E2Q8N5Q1 922 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 WFDC9Q8NEX5 89 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 OR51D1Q8NGF3 324 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 OR56B1Q8NGI3 324 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 FCGR1BQ92637 280 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 S1PR3Q99500 378 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 GON7Q9BXV9 100 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 YTHDF1Q9BYJ9 559 aaKnown RBP9.14□□□□□ -0.95
RTN3-209ENST00000538995 IFI27L2Q9H2X8 130 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 GHITMQ9H3K2 345 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 PLSCR3Q9NRY6 295 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 AK3Q9UIJ7 227 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 ZNF580Q9UK33 172 aa9.14□□□□□ -0.95
RTN3-209ENST00000538995 TGP01266 2768 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 DNAH3Q8TD57 4116 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 A0A1W2PRX2 142 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 SOCS1O15524 211 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 PF4P02776 101 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 HLA-DRB3P79483 266 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 KHDC1LQ5JSQ8 128 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 C10orf99Q6UWK7 81 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 Q6ZPA2 131 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 STPG2Q8N412 459 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 IL1F10Q8WWZ1 152 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
RTN3-209ENST00000538995 RASL11BQ9BPW5 248 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 MRPL20Q9BYC9 149 aaKnown RBP9.13□□□□□ -0.95
RTN3-209ENST00000538995 ZFP57Q9NU63 452 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 PIPOXQ9P0Z9 390 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 SLC23A1Q9UHI7 598 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 RAB22AQ9UL26 194 aa9.13□□□□□ -0.95
RTN3-209ENST00000538995 SAA2-SAA4A0A096LPE2 208 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 TMEM272A0A1B0GTI8 110 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 IFITM5A6NNB3 132 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 ZNF736B4DX44 427 aaPredicted RBP9.12□□□□□ -0.95
RTN3-209ENST00000538995 RAB29O14966 203 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 SAA2P0DJI9 122 aaPredicted RBP9.12□□□□□ -0.95
RTN3-209ENST00000538995 RAB6AP20340 208 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 ZBTB25P24278 435 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 VEGFCP49767 419 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 TMEM50BP56557 158 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 CLDN12P56749 244 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 RPL23AP62750 156 aaKnown RBP9.12□□□□□ -0.95
RTN3-209ENST00000538995 C2orf76Q3KRA6 126 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 ZNF329Q86UD4 541 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 SETD6Q8TBK2 473 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 EDARADDQ8WWZ3 215 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 ARHGAP5-AS1Q96IT6 56 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 NABP2Q9BQ15 211 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 PECRQ9BY49 303 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 Q9N2K0 584 aa9.12□□□□□ -0.95
RTN3-209ENST00000538995 DUS4LO95620 317 aaKnown RBP9.11□□□□□ -0.95
RTN3-209ENST00000538995 DIRAS3O95661 229 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 IGF1P05019 195 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 CD33P20138 364 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 RAB3BP20337 219 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 SOX6P35712 828 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 MRPS15P82914 257 aaKnown RBP9.11□□□□□ -0.95
RTN3-209ENST00000538995 MMDQ15546 238 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 PLAC9Q5JTB6 97 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 HES5Q5TA89 166 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms