RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ASTLQ6HA08 431 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 OR5AS1Q8N127 324 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 OR10G3Q8NGC4 313 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 MRAP2Q96G30 205 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 LIME1Q9H400 295 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 NPVFQ9HCQ7 196 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 IL36BQ9NZH7 164 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 PIGBOS1A0A0B4J2F0 54 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 A0A0G2JMM0 328 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 LOC101059948A0A1B0GTJ6 334 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 A0A1W2PPB8 328 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 KIR3DP1A8MWS1 328 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 C11orf94C9JXX5 98 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 C11orf98E9PRG8 122 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 J3KRW8 73 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 PLPP3O14495 311 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 FUT6P51993 359 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 PRICKLE4Q2TBC4 344 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 PRTGQ2VWP7 1150 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 Q6ZNB5 142 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 RPP25LQ8N5L8 163 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 SFXN3Q9BWM7 321 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 FAM206AQ9NX38 181 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 SPACA6W5XKT8 324 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 TCF20Q9UGU0 1960 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 TMEM265A0A087WTH1 108 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 CXCL11O14625 94 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 B3GALT2O43825 422 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 PAGE4O60829 102 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 POU2F2P09086 479 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 HMGA1P17096 107 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 CEBPBP17676 345 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 NTF3P20783 257 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 PAX9P55771 341 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 SEC11AP67812 179 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 ACKR1Q16570 336 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 RSPO2Q6UXX9 243 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 FER1L6-AS2Q96M78 137 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 ZFYVE21Q9BQ24 234 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 RTN4RQ9BZR6 473 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 UBE2ZQ9H832 354 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 GEMIN7Q9H840 131 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 PGPEP1Q9NXJ5 209 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 JKAMPQ9P055 326 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 NAT8BQ9UHF3 227 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 COA3Q9Y2R0 106 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 TIMM9Q9Y5J7 89 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 C1QTNF9BB2RNN3 333 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 K7EP34 96 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 HLA-DRB1P01911 266 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 CD1BP29016 333 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 PSG4Q00888 419 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 HIST1H1AQ02539 215 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 TLE1Q04724 770 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 EGR4Q05215 589 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 C17orf67Q0P5P2 114 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 IGFBP7Q16270 282 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 Q56UQ5 140 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 LCN12Q6JVE5 192 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 RNF144BQ7Z419 303 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 C6orf201Q7Z4U5 140 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 VN1R2Q8NFZ6 395 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 OR2Z1Q8NG97 314 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 RNF133Q8WVZ7 376 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 FAM60AQ9NP50 221 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 RARRES3Q9UL19 164 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 DAPP1Q9UN19 280 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 FAM231BA6NCW3 169 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF207O43670 478 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF16P17020 682 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 TIMP3P35625 211 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 EIF3IQ13347 325 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 TXNDC8Q6A555 127 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 SHISA2Q6UWI4 295 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF525Q8N782 197 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 TSKUQ8WUA8 353 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 HOXB13Q92826 284 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 FGF14Q92915 247 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 CYYR1Q96J86 154 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 TAAR6Q96RI8 345 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 ULBP2Q9BZM5 246 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 FOXQ1Q9C009 403 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 TXNIPQ9H3M7 391 aa7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 FNDC4Q9H6D8 234 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-202ENST00000537556 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 SLC22A20A6NK97 555 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 OR11H12B2RN74 326 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 H3BP45 60 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 GPR75O95800 540 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 IGKV1D-16P01601 117 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF17P17021 662 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 CMPK1P30085 196 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 UBE2G1P62253 170 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 TBR1Q16650 682 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 NMSQ5H8A3 153 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 LINC00346Q8IVM7 164 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 OR11H1Q8NG94 326 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms