RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 RAB9BQ9NP90 201 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 COMMD3Q9UBI1 195 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 SLC23A1Q9UHI7 598 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 FAM90A9PA6NNJ1 464 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 OOSP1A8MZH6 123 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 ZNF736B4DX44 427 aaPredicted RBP14.32□□□□□ -0.12
DDX55-204ENST00000536079 ST8SIA5O15466 376 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 FABP7O15540 132 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 NDUFA7O95182 113 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 CRYBA1P05813 215 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 GSTP1P09211 210 aaKnown RBP14.32□□□□□ -0.12
DDX55-204ENST00000536079 CEACAM6P40199 344 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 OR3A3P47888 321 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 RORCP51449 518 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 ZNF137PP52743 207 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 ZNF816Q0VGE8 651 aaPredicted RBP14.32□□□□□ -0.12
DDX55-204ENST00000536079 UBE2NLQ5JXB2 153 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 LY6G6FQ5SQ64 297 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 Q6ZS46 218 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 LYG1Q8N1E2 194 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 ST6GALNAC5Q9BVH7 336 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 AUNIPQ9H7T9 357 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 SIGLEC9Q9Y336 463 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 CEPT1Q9Y6K0 416 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 STAB1Q9NY15 2570 aa14.32□□□□□ -0.12
DDX55-204ENST00000536079 IGHV1-3A0A0C4DH29 117 aa14.31□□□□□ -0.12
DDX55-204ENST00000536079 POM121CA8CG34 1229 aa14.31□□□□□ -0.12
DDX55-204ENST00000536079 SNRNP70P08621 437 aaKnown RBP14.31□□□□□ -0.12
DDX55-204ENST00000536079 MRPS15P82914 257 aaKnown RBP14.31□□□□□ -0.12
DDX55-204ENST00000536079 STEAP3Q658P3 488 aa14.31□□□□□ -0.12
DDX55-204ENST00000536079 CAPSLQ8WWF8 208 aa14.31□□□□□ -0.12
DDX55-204ENST00000536079 RTN4IP1Q8WWV3 396 aaPredicted RBP14.31□□□□□ -0.12
DDX55-204ENST00000536079 KCTD12Q96CX2 325 aaKnown RBP14.31□□□□□ -0.12
DDX55-204ENST00000536079 C11orf54Q9H0W9 315 aaPredicted RBP14.31□□□□□ -0.12
DDX55-204ENST00000536079 SCOCQ9UIL1 159 aa14.31□□□□□ -0.12
DDX55-204ENST00000536079 MGAT4AQ9UM21 535 aa14.31□□□□□ -0.12
DDX55-204ENST00000536079 XRCC3O43542 346 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 HPGDSO60760 199 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 TSPAN9O75954 239 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 SCGNO76038 276 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 GAPDHP04406 335 aaKnown RBP14.3□□□□□ -0.12
DDX55-204ENST00000536079 FCER2P06734 321 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 DTYMKP23919 212 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 TALDO1P37837 337 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 RAB7AP51149 207 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 TMBIM6P55061 237 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 GNG2P59768 71 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 KRTAP10-3P60369 221 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 RPL15P61313 204 aaKnown RBP14.3□□□□□ -0.12
DDX55-204ENST00000536079 FOXL1Q12952 345 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 PNLIPRP3Q17RR3 467 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 CCDC144NLQ6NUI1 221 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 C12orf54Q6X4T0 127 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 MOB3BQ86TA1 216 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 GVQW1Q8N7I0 195 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 OR4A4PQ8NGN8 299 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 LINC01006Q8NI28 216 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 ZNF251Q9BRH9 671 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 AGMATQ9BSE5 352 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 CABLES2Q9BTV7 478 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 DIABLOQ9NR28 239 aa14.3□□□□□ -0.12
DDX55-204ENST00000536079 A0A0A6YYH2 397 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 A6NJ64 397 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 SH2D7A6NKC9 451 aaPredicted RBP14.29□□□□□ -0.12
DDX55-204ENST00000536079 H3BMQ9 156 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 BET1O15155 118 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 PROP1O75360 226 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 ZNF182P17025 639 aaPredicted RBP14.29□□□□□ -0.12
DDX55-204ENST00000536079 ELK1P19419 428 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 ZBTB25P24278 435 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 BRS3P32247 399 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 MNDAP41218 407 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 TAS2R20P59543 309 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 BLCAPP62952 87 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 SRSF4Q08170 494 aaKnown RBP14.29□□□□□ -0.12
DDX55-204ENST00000536079 HABP2Q14520 560 aaPredicted RBP14.29□□□□□ -0.12
DDX55-204ENST00000536079 HNF4GQ14541 408 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 ARL6IP1Q15041 203 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 SRSF7Q16629 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX55-204ENST00000536079 RPL39P5Q59GN2 51 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 Q6ZS49 121 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 OR8H3Q8N146 312 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 RAB2BQ8WUD1 216 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 ISOC1Q96CN7 298 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 ABHD14BQ96IU4 210 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 MRPL20Q9BYC9 149 aaKnown RBP14.29□□□□□ -0.12
DDX55-204ENST00000536079 TOLLIPQ9H0E2 274 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 C16orf95Q9H693 158 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 RDH8Q9NYR8 311 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 RNF150Q9ULK6 438 aa14.29□□□□□ -0.12
DDX55-204ENST00000536079 SAA2-SAA4A0A096LPE2 208 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 TRBV6-7A0A0A0MS04 114 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 MEIS3P1A6NDR6 274 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 HSPA12AO43301 675 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 LANCL1O43813 399 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 RGS11O94810 467 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 IGKV1D-33P01593 117 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 IGKV1-33P01594 117 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 HLA-DQB1P01920 261 aa14.28□□□□□ -0.12
DDX55-204ENST00000536079 AMY1AP04745 511 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms