RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TNFSF10P50591 281 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 HAGHQ16775 308 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 OR8G5Q8NG78 346 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 RAB40CQ96S21 281 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 EGLN1Q9GZT9 426 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 SMDT1Q9H4I9 107 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 CFAP47Q6ZTR5 3102 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 A0A1W2PPH5 198 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 BTBD17A6NE02 478 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 KIAA1324LA8MWY0 1029 aaPredicted RBP11.12□□□□□ -0.63
LDLR-203ENST00000535915 H0YL77 283 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 MT-ND4LP03901 98 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 RAC2P15153 192 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 SOX8P57073 446 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 ZNF146Q15072 292 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 RHEBQ15382 184 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 TRIB1Q96RU8 372 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 GGACTQ9BVM4 153 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 TMPRSS5Q9H3S3 457 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 LIN7CQ9NUP9 197 aaKnown RBP11.12□□□□□ -0.63
LDLR-203ENST00000535915 PUS1Q9Y606 427 aaKnown RBP eCLIP11.12□□□□□ -0.63
LDLR-203ENST00000535915 PRR14LQ5THK1 2151 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 ZFHX4Q86UP3 3567 aa11.12□□□□□ -0.63
LDLR-203ENST00000535915 SPENQ96T58 3664 aaKnown RBP11.12□□□□□ -0.63
LDLR-203ENST00000535915 DFFBO76075 338 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 IFNA5P01569 189 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 CEACAM1P13688 526 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 CEBPGP53567 150 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 TAS2R30P59541 319 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 PSG7Q13046 419 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 THNSL2Q86YJ6 484 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 ZNF295-AS1Q8N0V1 137 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 LSM10Q969L4 123 aaKnown RBP11.11□□□□□ -0.63
LDLR-203ENST00000535915 TUBA4BQ9H853 241 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 KIAA1456Q9P272 454 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 WSB1Q9Y6I7 421 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 HEATR1Q9H583 2144 aaKnown RBP11.11□□□□□ -0.63
LDLR-203ENST00000535915 A6NLC8 198 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 IQCF6A8MYZ5 107 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 SYNGR2O43760 224 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 ARG1P05089 322 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 WNT2P09544 360 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 IAPPP10997 89 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 CEBPDP49716 269 aaPredicted RBP11.11□□□□□ -0.63
LDLR-203ENST00000535915 TLE4Q04727 773 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 TRIP6Q15654 476 aaKnown RBP11.11□□□□□ -0.63
LDLR-203ENST00000535915 CNEP1R1Q8N9A8 125 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 OBP2BQ9NPH6 170 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 OR8U8P0C7N1 319 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 AGAP20933 346 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 CCL11P51671 97 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 GABRA6Q16445 453 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 BEND4Q6ZU67 534 aa11.11□□□□□ -0.63
LDLR-203ENST00000535915 MBNL3Q9NUK0 354 aaKnown RBP11.11□□□□□ -0.63
LDLR-203ENST00000535915 A0A1W2PPE2 198 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 HAND1O96004 215 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 MPV17P39210 176 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 ZNF585BQ52M93 769 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 INO80CQ6PI98 192 aaPredicted RBP11.1□□□□□ -0.63
LDLR-203ENST00000535915 FAM214BQ7L5A3 538 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 CXorf67Q86X51 503 aaPredicted RBP11.1□□□□□ -0.63
LDLR-203ENST00000535915 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 DRAM1Q8N682 238 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 KLF14Q8TD94 323 aaPredicted RBP11.1□□□□□ -0.63
LDLR-203ENST00000535915 PSENENQ9NZ42 101 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 CLCF1Q9UBD9 225 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 WIPI2Q9Y4P8 454 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 USF3Q68DE3 2245 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 CHD3Q12873 2000 aaKnown RBP11.1□□□□□ -0.63
LDLR-203ENST00000535915 NKX2-8O15522 239 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 METTL15P1P0C7V9 234 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 NCMAPQ5T1S8 102 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 Q6ZT83 130 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 TOLLIPQ9H0E2 274 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 UNKLQ9H9P5 680 aaKnown RBP11.1□□□□□ -0.63
LDLR-203ENST00000535915 KCNIP1Q9NZI2 227 aa11.1□□□□□ -0.63
LDLR-203ENST00000535915 TMEM210A6NLX4 147 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 AGFG2O95081 481 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 HOXC12P31275 282 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 RHOVQ96L33 236 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 RBM14Q96PK6 669 aaKnown RBP11.09□□□□□ -0.63
LDLR-203ENST00000535915 INTS1Q8N201 2190 aaKnown RBP11.09□□□□□ -0.63
LDLR-203ENST00000535915 hCG_1809904A0A1W2PP81 198 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 A0A1W2PR64 198 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 A0A1W2PRV1 198 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 AP4M1O00189 453 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 PSPNO60542 156 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 IGHV2-5P01817 119 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 HBE1P02100 147 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 CD200P41217 278 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 OR2B8PP59922 312 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 DPPA3Q6W0C5 159 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 ZNF826PQ6ZT77 177 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 RBMXL1Q96E39 390 aaKnown RBP11.09□□□□□ -0.63
LDLR-203ENST00000535915 DOCK11Q5JSL3 2073 aa11.09□□□□□ -0.63
LDLR-203ENST00000535915 WNT9BO14905 357 aa11.08□□□□□ -0.64
LDLR-203ENST00000535915 SRP19P09132 144 aaKnown RBP11.08□□□□□ -0.64
LDLR-203ENST00000535915 RAB5AP20339 215 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms