RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 LSAMPQ13449 338 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 P2RY14Q15391 338 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 OR2W3Q7Z3T1 314 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 SLC35E3Q7Z769 313 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 ZNF329Q86UD4 541 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 OR8H1Q8NGG4 311 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 PHF21AQ96BD5 680 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 YPEL2Q96QA6 119 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 S1PR3Q99500 378 aa11.08□□□□□ -0.64
SF3B2-215ENST00000534307 TRBV6-6A0A0A6YYG2 114 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 SERPINE3A8MV23 424 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 LDLRAD4O15165 306 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 SOCS1O15524 211 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 PF4V1P10720 104 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 CALRP27797 417 aaKnown RBP11.07□□□□□ -0.64
SF3B2-215ENST00000534307 BLVRBP30043 206 aaPredicted RBP11.07□□□□□ -0.64
SF3B2-215ENST00000534307 SSX1Q16384 188 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 ETV3LQ6ZN32 361 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 ZNF833PQ6ZTB9 187 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 STPG2Q8N412 459 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 GALMQ96C23 342 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 IFI27L2Q9H2X8 130 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 ACOT13Q9NPJ3 140 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 LINC00527Q9UJ94 153 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 AK6Q9Y3D8 172 aaKnown RBP11.07□□□□□ -0.64
SF3B2-215ENST00000534307 LRRC42Q9Y546 428 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 RYR2Q92736 4967 aa11.07□□□□□ -0.64
SF3B2-215ENST00000534307 NCBP2LA6PVI3 153 aaKnown RBP11.06□□□□□ -0.64
SF3B2-215ENST00000534307 DENRO43583 198 aaKnown RBP11.06□□□□□ -0.64
SF3B2-215ENST00000534307 ARSBP15848 533 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 F2RL1P55085 397 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 RPL23AP62750 156 aaKnown RBP11.06□□□□□ -0.64
SF3B2-215ENST00000534307 RAB11BQ15907 218 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 CD200R1LQ6Q8B3 271 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 MOB1BQ7L9L4 216 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 ZNF367Q7RTV3 350 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 FOXRED2Q8IWF2 684 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 OR51D1Q8NGF3 324 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 HSPB9Q9BQS6 159 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 MRPL20Q9BYC9 149 aaKnown RBP11.06□□□□□ -0.64
SF3B2-215ENST00000534307 Q9H521 79 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 PLGRKTQ9HBL7 147 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 AK3Q9UIJ7 227 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 HSF4Q9ULV5 492 aa11.06□□□□□ -0.64
SF3B2-215ENST00000534307 SAA2-SAA4A0A096LPE2 208 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 SHISA3A0PJX4 238 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 AP4M1O00189 453 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 RGS11O94810 467 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 SAA2P0DJI9 122 aaPredicted RBP11.05□□□□□ -0.64
SF3B2-215ENST00000534307 IGLL1P15814 213 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 CD33P20138 364 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 OR3A3P47888 321 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 TMEM50BP56557 158 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 CLDN12P56749 244 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 CFHR3Q02985 330 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 KHDC1LQ5JSQ8 128 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 C18orf65Q6ZTR6 163 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 REC114Q7Z4M0 266 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 COMMD1Q8N668 190 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 LINC00482Q8N8I6 264 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 FAM3DQ96BQ1 224 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 NABP2Q9BQ15 211 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 ZNF251Q9BRH9 671 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 HDHD3Q9BSH5 251 aaPredicted RBP11.05□□□□□ -0.64
SF3B2-215ENST00000534307 URM1Q9BTM9 101 aaKnown RBP11.05□□□□□ -0.64
SF3B2-215ENST00000534307 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
SF3B2-215ENST00000534307 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
SF3B2-215ENST00000534307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.05□□□□□ -0.64
SF3B2-215ENST00000534307 ZFP57Q9NU63 452 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 PLEKHJ1Q9NW61 149 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 NDUFB11Q9NX14 153 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 ABRACLQ9P1F3 81 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 ZNF580Q9UK33 172 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 BLOC1S6Q9UL45 172 aa11.05□□□□□ -0.64
SF3B2-215ENST00000534307 PF4P02776 101 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 SLC35B1P78383 322 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 PLA2G7Q13093 441 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 PLAC9Q5JTB6 97 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 FOXB2Q5VYV0 432 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 FAM71F2Q6NXP2 309 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 RNF152Q8N8N0 203 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 OR2AK2Q8NG84 335 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 IL1F10Q8WWZ1 152 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 RITA1Q96K30 269 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 RASL11BQ9BPW5 248 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 AGMATQ9BSE5 352 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 C12orf4Q9NQ89 552 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 NECAP2Q9NVZ3 263 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 V9GY05 133 aa11.04□□□□□ -0.64
SF3B2-215ENST00000534307 TRAV1-2A0A0B4J238 106 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 ITGB1BP1O14713 200 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 IGF1P05019 195 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 SLC6A1P30531 599 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 SOX6P35712 828 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 THBS3P49746 956 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 PSMD7P51665 324 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 GABARAPL2P60520 117 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 C2orf76Q3KRA6 126 aa11.03□□□□□ -0.64
SF3B2-215ENST00000534307 MRPL41Q8IXM3 137 aaKnown RBP11.03□□□□□ -0.64
SF3B2-215ENST00000534307 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms