RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 STUB1Q9UNE7 303 aa12.3□□□□□ -0.44
UBXN1-217ENST00000534176 SSR3Q9UNL2 185 aa12.3□□□□□ -0.44
UBXN1-217ENST00000534176 NCBP2LA6PVI3 153 aaKnown RBP12.29□□□□□ -0.44
UBXN1-217ENST00000534176 SERPINE3A8MV23 424 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 RAB29O14966 203 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 LDLRAD4O15165 306 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 RRP9O43818 475 aaKnown RBP12.29□□□□□ -0.44
UBXN1-217ENST00000534176 TSPAN15O95858 294 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 IGHG2P01859 326 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 PSMB9P28065 219 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 VEGFCP49767 419 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 KIR2DS1Q14954 304 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 KCTD21Q4G0X4 260 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 C9orf152Q5JTZ5 239 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 Q8N6K4 173 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 FAM110DQ8TAY7 271 aaPredicted RBP12.29□□□□□ -0.44
UBXN1-217ENST00000534176 IL1F10Q8WWZ1 152 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 GFI1Q99684 422 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 RASL11BQ9BPW5 248 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 CMSS1Q9BQ75 279 aaKnown RBP12.29□□□□□ -0.44
UBXN1-217ENST00000534176 ZNF580Q9UK33 172 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
UBXN1-217ENST00000534176 PSMB11A5LHX3 300 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 FOXI3A8MTJ6 420 aaPredicted RBP12.28□□□□□ -0.44
UBXN1-217ENST00000534176 AP4M1O00189 453 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 SOCS1O15524 211 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 HSPA12AO43301 675 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 CD28P10747 220 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 REG1BP48304 166 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 ZNF134P52741 427 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 SCAND1P57086 179 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 HLA-DRB3P79483 266 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 DIAPH2-AS1Q14236 149 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 C11orf44Q8N8P7 122 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 UBALD1Q8TB05 177 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 SETD6Q8TBK2 473 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 RAB3CQ96E17 227 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 CITED2Q99967 270 aaPredicted RBP12.28□□□□□ -0.44
UBXN1-217ENST00000534176 ABCG5Q9H222 651 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 VCX3AQ9NNX9 186 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 ZFP57Q9NU63 452 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 SLC23A1Q9UHI7 598 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 AK3Q9UIJ7 227 aa12.28□□□□□ -0.44
UBXN1-217ENST00000534176 TCRBV4S1A1TA0A5B7 111 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 NOTOA8MTQ0 251 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 CD3GP09693 182 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 OR5H8P0DN80 308 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 MC5RP33032 325 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 PPP1CCP36873 323 aaKnown RBP12.27□□□□□ -0.45
UBXN1-217ENST00000534176 LSAMPQ13449 338 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 HNF4GQ14541 408 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBXN1-217ENST00000534176 TIMM50Q3ZCQ8 353 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 C22orf42Q6IC83 251 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 Q6ZS46 218 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 ZNF833PQ6ZTB9 187 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 OR52L2PQ8NGH6 319 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 PHF21AQ96BD5 680 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 R3HDM4Q96D70 268 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 ARHGAP5-AS1Q96IT6 56 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 PECRQ9BY49 303 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 Q9N2K0 584 aa12.27□□□□□ -0.45
UBXN1-217ENST00000534176 RRP15Q9Y3B9 282 aaKnown RBP12.27□□□□□ -0.45
UBXN1-217ENST00000534176 A0A0A6YYD4 124 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 TMEM272A0A1B0GTI8 110 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 OR5H14A6NHG9 310 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 SLC31A2O15432 143 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 PF4V1P10720 104 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 TMEM50BP56557 158 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 NSUN5P1Q3KNT7 163 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 HES5Q5TA89 166 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 OR4A4PQ8NGN8 299 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 OR10R2Q8NGX6 335 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 KCTD7Q96MP8 289 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 RNF5Q99942 180 aa12.26□□□□□ -0.45
UBXN1-217ENST00000534176 TXNL4BQ9NX01 149 aaKnown RBP12.26□□□□□ -0.45
UBXN1-217ENST00000534176 TRDCB7Z8K6 153 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 RBBP9O75884 186 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 DUS4LO95620 317 aaKnown RBP12.25□□□□□ -0.45
UBXN1-217ENST00000534176 SOX6P35712 828 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 CLDN12P56749 244 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 PITPNAQ00169 270 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 TMEM95Q3KNT9 176 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 TEX38Q6PEX7 206 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 FAM71E2Q8N5Q1 922 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 Q8N9W7 124 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.25□□□□□ -0.45
UBXN1-217ENST00000534176 ZNF251Q9BRH9 671 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 KCNK15Q9H427 330 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 KIAA1456Q9P272 454 aa12.25□□□□□ -0.45
UBXN1-217ENST00000534176 SAA2-SAA4A0A096LPE2 208 aa12.24□□□□□ -0.45
UBXN1-217ENST00000534176 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
UBXN1-217ENST00000534176 SAA2P0DJI9 122 aaPredicted RBP12.24□□□□□ -0.45
UBXN1-217ENST00000534176 HIST1H1DP16402 221 aaKnown RBP12.24□□□□□ -0.45
UBXN1-217ENST00000534176 TALDO1P37837 337 aa12.24□□□□□ -0.45
UBXN1-217ENST00000534176 CEACAM6P40199 344 aa12.24□□□□□ -0.45
UBXN1-217ENST00000534176 GPR12P47775 334 aa12.24□□□□□ -0.45
UBXN1-217ENST00000534176 DEFA6Q01524 100 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms