RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	TMPRSS11A	Q6ZMR5	421 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	PLEKHG7	Q6ZR37	379 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	NR2C2AP	Q86WQ0	139 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	SLC30A8	Q8IWU4	369 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	OR5L1	Q8NGL2	311 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	OR52E5	Q8NH55	327 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	FNDC8	Q8TC99	324 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	TMEM239	Q8WW34	195 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	ZNRF4	Q8WWF5	429 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	IL1F10	Q8WWZ1	152 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	GTF2H4	Q92759	462 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	OR5M11	Q96RB7	305 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	TM2D3	Q9BRN9	247 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	C1QTNF4	Q9BXJ3	329 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	IKZF5	Q9H5V7	419 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	ATPIF1	Q9UII2	106 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	KIF25	Q9UIL4	384 aa		4.4	□□□□□ -1.71
PUM1-222	ENST00000531867	PLEC	Q15149	4684 aa	Known RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	IGLV5-45	A0A087WSX0	123 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867		A0A0A6YYH2	397 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	IGLV9-49	A0A0B4J1Y8	123 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	TRBV7-9	A0A0J9YWB2	115 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867		A6NJ64	397 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	IFITM10	A6NMD0	228 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	DYNC1I1	O14576	645 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	TOR1A	O14656	332 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	SGCE	O43556	437 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	GMDS	O60547	372 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	CST4	P01036	141 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	PSMB6	P28072	239 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	SLC6A1	P30531	599 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	ALDH3A1	P30838	453 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	GPR183	P32249	361 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	HOXA1	P49639	335 aa	Predicted RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	ERVFC1-1	P60608	527 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	ELF3	P78545	371 aa	Predicted RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	IL5RA	Q01344	420 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	SCRN3	Q0VDG4	424 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	RGN	Q15493	299 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	RGS21	Q2M5E4	152 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	KRTAP27-1	Q3LI81	207 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	WDR38	Q5JTN6	314 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	LY6G6F	Q5SQ64	297 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	CEP85L	Q5SZL2	805 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	SLC36A1	Q7Z2H8	476 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	FAM122B	Q7Z309	247 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	C11orf53	Q8IXP5	236 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	DYNAP	Q8N1N2	210 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	MTURN	Q8N3F0	131 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	C11orf42	Q8N5U0	333 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	FAM216B	Q8N7L0	139 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	OR51D1	Q8NGF3	324 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	OR5T2	Q8NGG2	359 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	OR52H1	Q8NGJ2	320 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	TCP10L	Q8TDR4	215 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	GATAD1	Q8WUU5	269 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	SLC7A6	Q92536	515 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	MAL2	Q969L2	176 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	C12orf43	Q96C57	262 aa	Known RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	ISOC1	Q96CN7	298 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	RNF170	Q96K19	258 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	OR52E6	Q96RD3	313 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	CCL13	Q99616	98 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	SLC22A4	Q9H015	551 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	TXNIP	Q9H3M7	391 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	TPT1P8	Q9HAU6	139 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	CACYBP	Q9HB71	228 aa	Known RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	MEPE	Q9NQ76	525 aa	Predicted RBP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	OR2S2	Q9NQN1	319 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	INIP	Q9NRY2	104 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	KCNG2	Q9UJ96	466 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	SMAD5-AS1	Q9Y6J3	95 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	SORL1	Q92673	2214 aa		4.39	□□□□□ -1.71
PUM1-222	ENST00000531867	TRDC	B7Z8K6	153 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	NDUFB3	O43676	98 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	SOX15	O60248	233 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	FAS	P25445	335 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	ID1	P41134	155 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	AQP2	P41181	271 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	RAB13	P51153	203 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	FUT6	P51993	359 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	CAV3	P56539	151 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	GNG11	P61952	73 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	HIST1H3A	P68431	136 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	CD47	Q08722	323 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	FADD	Q13158	208 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	AQP6	Q13520	282 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	LAGE3	Q14657	143 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	GNMT	Q14749	295 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	HIST2H3PS2	Q5TEC6	136 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	ZNF691	Q5VV52	312 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	TTC33	Q6PID6	262 aa	Predicted RBP	4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	C10orf99	Q6UWK7	81 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	ZNF826P	Q6ZT77	177 aa		4.38	□□□□□ -1.71
PUM1-222	ENST00000531867	HIST2H3A	Q71DI3	136 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms