RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 YPEL2Q96QA6 119 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 HDHD3Q9BSH5 251 aaPredicted RBP8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 ABHD14AQ9BUJ0 271 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 MRPL20Q9BYC9 149 aaKnown RBP8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 PARP12Q9H0J9 701 aaKnown RBP8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 ISYNA1Q9NPH2 558 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 JPT1Q9UK76 154 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 SHISA3A0PJX4 238 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 SLC17A2O00624 439 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 TXNL1O43396 289 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 BPNT1O95861 308 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 CNTFRP26992 372 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 THBS3P49746 956 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 TMEM50BP56557 158 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 CLDN12P56749 244 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 CFHR3Q02985 330 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 MLLT11Q13015 90 aaPredicted RBP8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 SSX1Q16384 188 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 LY6G6FQ5SQ64 297 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 IZUMO2Q6UXV1 221 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 ZNF833PQ6ZTB9 187 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 PRSS48Q7RTY5 328 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 REC114Q7Z4M0 266 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 FOXRED2Q8IWF2 684 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 SVOPQ8N4V2 548 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 FAM89BQ8N5H3 189 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 MRAPQ8TCY5 172 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 GALMQ96C23 342 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 DUX3Q96PT4 197 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 MGLLQ99685 303 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 RASL11BQ9BPW5 248 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 ZNF251Q9BRH9 671 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 CCDC90BQ9GZT6 254 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 IFI27L2Q9H2X8 130 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 RAB9BQ9NP90 201 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 AK3Q9UIJ7 227 aa8.19□□□□□ -1.1
PRPF40B-204ENST00000527253 SAA2-SAA4A0A096LPE2 208 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 TRBV6-6A0A0A6YYG2 114 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 K7EIL1 84 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 AP4M1O00189 453 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 LDLRAD4O15165 306 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 RPLP1P05386 114 aaKnown RBP8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 SAA2P0DJI9 122 aaPredicted RBP8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 PNLIPRP3Q17RR3 467 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 COMMD1Q8N668 190 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 OR51D1Q8NGF3 324 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 OR8H1Q8NGG4 311 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 RCC1LQ96I51 464 aaKnown RBP8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 CNBD2Q96M20 576 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 P2RX4Q99571 388 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 ZFP57Q9NU63 452 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 PLEKHJ1Q9NW61 149 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 LRRC42Q9Y546 428 aa8.18□□□□□ -1.1
PRPF40B-204ENST00000527253 WI2-2373I1.2A0A1W2PRP0 233 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 ERICH4A6NGS2 130 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 PROP1O75360 226 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 IGF1P05019 195 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 SCTP09683 121 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 SLC2A2P11168 524 aaPredicted RBP8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 ARSBP15848 533 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 CALRP27797 417 aaKnown RBP8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 HOXD3P31249 432 aaPredicted RBP8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 SOX6P35712 828 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 MYCNOSP40205 109 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 ACTBP60709 375 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 SLC35B1P78383 322 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 KIAA0141Q14154 515 aaPredicted RBP8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 TRAM1Q15629 374 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 RAB11BQ15907 218 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 C2orf76Q3KRA6 126 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 RPL39P5Q59GN2 51 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 PLAC9Q5JTB6 97 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 TEX38Q6PEX7 206 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 ZNF695Q8IW36 515 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 RNF152Q8N8N0 203 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 SETD6Q8TBK2 473 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 IL1F10Q8WWZ1 152 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 FAM3DQ96BQ1 224 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 ARHGAP5-AS1Q96IT6 56 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 AGMATQ9BSE5 352 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 PLGRKTQ9HBL7 147 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 CHMP1AQ9HD42 196 aaPredicted RBP8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 Q9N2K0 584 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 OR1A1Q9P1Q5 309 aa8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 ZNF107Q9UII5 783 aaPredicted RBP8.17□□□□□ -1.1
PRPF40B-204ENST00000527253 IGHV7-81A0A0B4J1V7 117 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 IGKV1-6A0A0C4DH72 117 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 TMEM272A0A1B0GTI8 110 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 G3V318 75 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 ARL6IP5O75915 188 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 RGS11O94810 467 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 CT45A6P0DMU7 189 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 CT45A5P0DMU8 189 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 CT45A7P0DMV0 189 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms