RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 IL1F10Q8WWZ1 152 aa13.94□□□□□ -0.18
NR1H3-228ENST00000525441 EAF1Q96JC9 268 aaPredicted RBP13.94□□□□□ -0.18
NR1H3-228ENST00000525441 AK3Q9UIJ7 227 aa13.94□□□□□ -0.18
NR1H3-228ENST00000525441 TMEM272A0A1B0GTI8 110 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 SH2D7A6NKC9 451 aaPredicted RBP13.93□□□□□ -0.18
NR1H3-228ENST00000525441 IFITM5A6NNB3 132 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 FOXI3A8MTJ6 420 aaPredicted RBP13.93□□□□□ -0.18
NR1H3-228ENST00000525441 LDLRAD4O15165 306 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 LANCL1O43813 399 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 OR2AK2Q8NG84 335 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 ARHGAP5-AS1Q96IT6 56 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 CITED2Q99967 270 aaPredicted RBP13.93□□□□□ -0.18
NR1H3-228ENST00000525441 C12orf4Q9NQ89 552 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 SCOCQ9UIL1 159 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 STUB1Q9UNE7 303 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 VWFP04275 2813 aa13.93□□□□□ -0.18
NR1H3-228ENST00000525441 NCBP2LA6PVI3 153 aaKnown RBP13.92□□□□□ -0.18
NR1H3-228ENST00000525441 MOSP00540 346 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 OPN1MWP04001 364 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 OPN1MW2P0DN77 364 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 OPN1MW3P0DN78 364 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 FGF9P31371 208 aaPredicted RBP13.92□□□□□ -0.18
NR1H3-228ENST00000525441 TMEM50BP56557 158 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 OR10A3P58181 314 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 MRPS15P82914 257 aaKnown RBP13.92□□□□□ -0.18
NR1H3-228ENST00000525441 HIST2H2BDQ6DRA6 164 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 OR4F17Q8NGA8 305 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 OR4X2Q8NGF9 303 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 OR8H1Q8NGG4 311 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 OR4F4Q96R69 305 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 CMSS1Q9BQ75 279 aaKnown RBP13.92□□□□□ -0.18
NR1H3-228ENST00000525441 PECRQ9BY49 303 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 SSR3Q9UNL2 185 aa13.92□□□□□ -0.18
NR1H3-228ENST00000525441 SHISA3A0PJX4 238 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 TFAP2AP05549 437 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 RAB6AP20340 208 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 GADD45AP24522 165 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 ALDH3B2P48448 385 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 HLA-DRB3P79483 266 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 C5orf24Q7Z6I8 188 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 Q8N6K4 173 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 RAB3CQ96E17 227 aa13.91□□□□□ -0.18
NR1H3-228ENST00000525441 TXNL4BQ9NX01 149 aaKnown RBP13.91□□□□□ -0.18
NR1H3-228ENST00000525441 METTL21EPA6NDL7 271 aa13.9□□□□□ -0.18
NR1H3-228ENST00000525441 CD3GP09693 182 aa13.9□□□□□ -0.18
NR1H3-228ENST00000525441 CD83Q01151 205 aa13.9□□□□□ -0.18
NR1H3-228ENST00000525441 TPRA1Q86W33 373 aa13.9□□□□□ -0.18
NR1H3-228ENST00000525441 FOXRED2Q8IWF2 684 aa13.9□□□□□ -0.18
NR1H3-228ENST00000525441 R3HDM4Q96D70 268 aa13.9□□□□□ -0.18
NR1H3-228ENST00000525441 HDHD3Q9BSH5 251 aaPredicted RBP13.9□□□□□ -0.18
NR1H3-228ENST00000525441 Q9N2K0 584 aa13.9□□□□□ -0.18
NR1H3-228ENST00000525441 LIN7CQ9NUP9 197 aaKnown RBP13.9□□□□□ -0.18
NR1H3-228ENST00000525441 TCRBV4S1A1TA0A5B7 111 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 PSMB11A5LHX3 300 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 NOTOA8MTQ0 251 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 SERPINE3A8MV23 424 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 HSPA12AO43301 675 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 ZBTB25P24278 435 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 RPL5P46777 297 aaKnown RBP13.89□□□□□ -0.19
NR1H3-228ENST00000525441 LSAMPQ13449 338 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 PLAC9Q5JTB6 97 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 FAM71F2Q6NXP2 309 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 Q6ZPA2 131 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 SLC35E3Q7Z769 313 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 OR10R2Q8NGX6 335 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 CHPT1Q8WUD6 406 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 EDARADDQ8WWZ3 215 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 PTX4Q96A99 478 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 RASL11BQ9BPW5 248 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 GHITMQ9H3K2 345 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 PIPOXQ9P0Z9 390 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 SLC23A1Q9UHI7 598 aa13.89□□□□□ -0.19
NR1H3-228ENST00000525441 TSSC4Q9Y5U2 329 aaPredicted RBP13.89□□□□□ -0.19
NR1H3-228ENST00000525441 NOTCH1P46531 2555 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 ZNF736B4DX44 427 aaPredicted RBP13.88□□□□□ -0.19
NR1H3-228ENST00000525441 ITGB1BP1O14713 200 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 IGHG2P01859 326 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 PLA2G7Q13093 441 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 ZNF833PQ6ZTB9 187 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 ODF3L1Q8IXM7 274 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 Q8N9W7 124 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 OR13F1Q8NGS4 319 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 KCTD7Q96MP8 289 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 S1PR3Q99500 378 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 MRPL20Q9BYC9 149 aaKnown RBP13.88□□□□□ -0.19
NR1H3-228ENST00000525441 IFI27L2Q9H2X8 130 aa13.88□□□□□ -0.19
NR1H3-228ENST00000525441 MEGF8Q7Z7M0 2845 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 SAA2-SAA4A0A096LPE2 208 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 ADARB2-AS1A8MUL3 147 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 TRDCB7Z8K6 153 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 RAB29O14966 203 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 ST8SIA5O15466 376 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 KCNAB3O43448 404 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 SAA2P0DJI9 122 aaPredicted RBP13.87□□□□□ -0.19
NR1H3-228ENST00000525441 CEACAM6P40199 344 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 OR3A3P47888 321 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 SLC35B1P78383 322 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 DEFA6Q01524 100 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 ARL6IP1Q15041 203 aa13.87□□□□□ -0.19
NR1H3-228ENST00000525441 KHDC1LQ5JSQ8 128 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms