RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 RANBP3Q9H6Z4 567 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-214ENST00000523777 HSD17B6O14756 317 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 FAM106CPP0CH98 169 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 SOX6P35712 828 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 PLA1AQ53H76 456 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 OLFML2AQ68BL7 652 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 CLVS1Q8IUQ0 354 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 OR52L2PQ8NGH6 319 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 CAPSLQ8WWF8 208 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 NPFFR1Q9GZQ6 430 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 BEX1Q9HBH7 125 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 C1RLQ9NZP8 487 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 SLC23A1Q9UHI7 598 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 MMP24Q9Y5R2 645 aa13.02□□□□□ -0.33
TRAPPC9-214ENST00000523777 A6NDX4 124 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 FABP7O15540 132 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 XRCC3O43542 346 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 CTXN2P0C2S0 81 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 ZNF182P17025 639 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 PPP1CCP36873 323 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 RAG2P55895 527 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 LY6EQ16553 131 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 CT45A1Q5HYN5 189 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 UTF1Q5T230 341 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 FAM71F2Q6NXP2 309 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 SAMD12Q8N8I0 201 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 CT45A3Q8NHU0 189 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 NAA50Q9GZZ1 169 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 PIPOXQ9P0Z9 390 aa13.01□□□□□ -0.33
TRAPPC9-214ENST00000523777 TRAV18A0A075B6X5 111 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 SMIM31A0A1B0GVY4 71 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 A0A1W2PPE3 182 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 LANCL1O43813 399 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 TSPAN9O75954 239 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 APOA1P02647 267 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 SCTP09683 121 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 PAX6P26367 422 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 CEACAM6P40199 344 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 CBX5P45973 191 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 RAB13P51153 203 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 ZNF134P52741 427 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 AWAT1Q58HT5 328 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 C11orf88Q6PI97 169 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 Q6ZPA2 131 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 TGIF2LXQ8IUE1 241 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 LYG1Q8N1E2 194 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 OR4C13Q8NGP0 309 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 OR10J5Q8NHC4 309 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 ST6GALNAC6Q969X2 333 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 CYYR1Q96J86 154 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 C16orf95Q9H693 158 aa13□□□□□ -0.33
TRAPPC9-214ENST00000523777 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 A0A1W2PPI3 338 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 TMEM235A6NFC5 223 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 M0QZK8 103 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 RAB29O14966 203 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 HABP2Q14520 560 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 GNMTQ14749 295 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 TMEM69Q5SWH9 247 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 RTN4IP1Q8WWV3 396 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 S1PR3Q99500 378 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 CABLES2Q9BTV7 478 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 TOLLIPQ9H0E2 274 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 COMMD3Q9UBI1 195 aa12.99□□□□□ -0.33
TRAPPC9-214ENST00000523777 CLPSL1A2RUU4 121 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 TIMM23O14925 209 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 SLC31A2O15432 143 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 OR2F2O95006 317 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 CD1BP29016 333 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 MOB3BQ86TA1 216 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 DRAM1Q8N682 238 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 C3orf56Q8N813 242 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 RBM14Q96PK6 669 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 GINS4Q9BRT9 223 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 ST6GALNAC5Q9BVH7 336 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 AUNIPQ9H7T9 357 aa12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 ZNF230Q9UIE0 474 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-214ENST00000523777 TRBV6-7A0A0A0MS04 114 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 GSTT2P0CG29 244 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 GSTT2BP0CG30 244 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 FAM53AQ6NSI3 398 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 IZUMO1Q8IYV9 350 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 OR56B4Q8NH76 319 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 OR2T6Q8NHC8 308 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 NUDCD2Q8WVJ2 157 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 CFHR4Q92496 578 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 PRSS22Q9GZN4 317 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 ZNF221Q9UK13 617 aa12.97□□□□□ -0.33
TRAPPC9-214ENST00000523777 BET1O15155 118 aa12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 TPPPO94811 219 aa12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 SNRNP70P08621 437 aaKnown RBP12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 RELBQ01201 579 aa12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 EBI3Q14213 229 aa12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 HES1Q14469 280 aa12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 CCBE1Q6UXH8 406 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 Q6ZSV7 163 aa12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 ZNF833PQ6ZTB9 187 aa12.96□□□□□ -0.33
TRAPPC9-214ENST00000523777 TMEM219Q86XT9 240 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms