RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 C1QTNF9BB2RNN3 333 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 CDIPTO14735 213 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 SYNGR2O43760 224 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 SMPD2O60906 423 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 IGKV1D-33P01593 117 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 IGKV1-33P01594 117 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 S100A8P05109 93 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 CD59P13987 128 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 MPLP40238 635 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 RPL23AP62750 156 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 PLGLB1Q02325 96 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 PLP2Q04941 152 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 ZNF766Q5HY98 468 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 FBXW9Q5XUX1 488 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 CDPF1Q6NVV7 123 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 LSM10Q969L4 123 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 GPR87Q9BY21 358 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 OPA3Q9H6K4 179 aa7.13□□□□□ -1.27
CTNNA1-210ENST00000518825 DCHS1Q96JQ0 3298 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 UBE2KP61086 200 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 EIF4EBP1Q13541 118 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 RAB40CQ96S21 281 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 ZNF251Q9BRH9 671 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 GNG13Q9P2W3 67 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 WIPI2Q9Y4P8 454 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 USF3Q68DE3 2245 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 CDX4O14627 284 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 WDR1O75083 606 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 NDUFS6O75380 124 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 FABP1P07148 127 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 CD55P08174 381 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 PGA5P0DJD9 388 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 CEACAM6P40199 344 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 RPS10P46783 165 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 LINC00205P59089 165 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 RPL30P62888 115 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 TLE4Q04727 773 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 KHDC3LQ587J8 217 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 DPPA3Q6W0C5 159 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 SPNS3Q6ZMD2 512 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 STX12Q86Y82 276 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 CA5BP1Q8WTZ4 195 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 RCC1LQ96I51 464 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 SSX3Q99909 188 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 STRADBQ9C0K7 418 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 NIT2Q9NQR4 276 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 PSENENQ9NZ42 101 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 TREM2Q9NZC2 230 aa7.12□□□□□ -1.27
CTNNA1-210ENST00000518825 C21orf140B9A014 251 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 PHOX2AO14813 284 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 WNT9BO14905 357 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 ZNF806P0C7X5 589 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 P0C879 139 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 ZNF883P0CG24 379 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 GLIPR1P48060 266 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 ZNF146Q15072 292 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 LRRC75BQ2VPJ9 315 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 LCN15Q6UWW0 184 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 C11orf53Q8IXP5 236 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 FGFRL1Q8N441 504 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 MBD3L1Q8WWY6 194 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 RBMXL1Q96E39 390 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 TVP23CQ96ET8 276 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 OR4C12Q96R67 309 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BKO60814 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 DFFBO76075 338 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 CNOT4O95628 575 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BJP06899 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HOXA5P20719 270 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BOP23527 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BBP33778 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BDP58876 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BCP62807 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 PSG7Q13046 419 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST2H2BEQ16778 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 GFI1BQ5VTD9 330 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 BEND4Q6ZU67 534 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 OR10G4Q8NGN3 311 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BHQ93079 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BNQ99877 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HIST1H2BMQ99879 126 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 TRAPPC2LQ9UL33 140 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 LRP5LA4QPB2 252 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 ZFP92A6NM28 416 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 IGHV2-70P01814 119 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 IGHV1-2P23083 117 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 MPV17P39210 176 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 EIF2S3P41091 472 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 SLC35E3Q7Z769 313 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 OR1L1Q8NH94 360 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 HES4Q9HCC6 221 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 CISD1Q9NZ45 108 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 DOK5Q9P104 306 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 MIOXQ9UGB7 285 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 RNF150Q9ULK6 438 aa7.11□□□□□ -1.27
CTNNA1-210ENST00000518825 MLNRO43193 412 aa7.1□□□□□ -1.27
CTNNA1-210ENST00000518825 BCL2P10415 239 aa7.1□□□□□ -1.27
CTNNA1-210ENST00000518825 PMP22Q01453 160 aa7.1□□□□□ -1.27
CTNNA1-210ENST00000518825 HNF4GQ14541 408 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms