RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MRPL41Q8IXM3 137 aaKnown RBP10.77□□□□□ -0.69
TCOF1-215ENST00000515516 LINC00482Q8N8I6 264 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 IL1F10Q8WWZ1 152 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 ZNF251Q9BRH9 671 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 TM2D1Q9BX74 207 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 RIMS4Q9H426 269 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-215ENST00000515516 ISYNA1Q9NPH2 558 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 PLSCR3Q9NRY6 295 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 PRKDCP78527 4128 aaKnown RBP10.77□□□□□ -0.69
TCOF1-215ENST00000515516 TGP01266 2768 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 OR5H8P0DN80 308 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 MYF6P23409 242 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 F2RL1P55085 397 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 LSAMPQ13449 338 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 FOXE3Q13461 319 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 IRF3Q14653 427 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 MMDQ15546 238 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 LY6G6FQ5SQ64 297 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 MOB1BQ7L9L4 216 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 DUSP21Q9H596 190 aa10.76□□□□□ -0.69
TCOF1-215ENST00000515516 ZMAT5Q9UDW3 170 aaKnown RBP10.76□□□□□ -0.69
TCOF1-215ENST00000515516 ZNF107Q9UII5 783 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-215ENST00000515516 TMEM14DPA8MWL7 114 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 ELANEP08246 267 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 PSMD7P51665 324 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 RAB25P57735 213 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 MLLT11Q13015 90 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-215ENST00000515516 UNC119Q13432 240 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 TPBGQ13641 420 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 P2RY14Q15391 338 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 HMGN3Q15651 99 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 RAB11BQ15907 218 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 DEFB121Q5J5C9 76 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 C18orf65Q6ZTR6 163 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 FAM71E2Q8N5Q1 922 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 NRG4Q8WWG1 115 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 NICN1Q9BSH3 213 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 MRPL20Q9BYC9 149 aaKnown RBP10.75□□□□□ -0.69
TCOF1-215ENST00000515516 PIPOXQ9P0Z9 390 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 KIAA1456Q9P272 454 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 MGAT4AQ9UM21 535 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 AK6Q9Y3D8 172 aaKnown RBP10.75□□□□□ -0.69
TCOF1-215ENST00000515516 PLXNB1O43157 2135 aa10.75□□□□□ -0.69
TCOF1-215ENST00000515516 CCL24O00175 119 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 SLC17A2O00624 439 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 RAB29O14966 203 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 RPLP1P05386 114 aaKnown RBP10.74□□□□□ -0.69
TCOF1-215ENST00000515516 SLC2A2P11168 524 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-215ENST00000515516 CPEP16870 476 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 HOXD3P31249 432 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-215ENST00000515516 HSPA13P48723 471 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 ACTBP60709 375 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 RPS25P62851 125 aaKnown RBP10.74□□□□□ -0.69
TCOF1-215ENST00000515516 QRFPP83859 136 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 TMEM65Q6PI78 240 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 ETV3LQ6ZN32 361 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 ZNF833PQ6ZTB9 187 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 PRSS48Q7RTY5 328 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 C5orf24Q7Z6I8 188 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 SVOPQ8N4V2 548 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 NABP2Q9BQ15 211 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 HSPB9Q9BQS6 159 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 CHCHD6Q9BRQ6 235 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 ANKRD60Q9BZ19 345 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 KCNK15Q9H427 330 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 ACOT13Q9NPJ3 140 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 BLOC1S6Q9UL45 172 aa10.74□□□□□ -0.69
TCOF1-215ENST00000515516 SAA2-SAA4A0A096LPE2 208 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 ST8SIA5O15466 376 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 SOCS1O15524 211 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 HSPA12AO43301 675 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 NAPSAO96009 420 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 IGHG4P01861 327 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 IGF1P05019 195 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 SAA2P0DJI9 122 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-215ENST00000515516 CD37P11049 281 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 CRHBPP24387 322 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 CALRP27797 417 aaKnown RBP10.73□□□□□ -0.69
TCOF1-215ENST00000515516 OR3A3P47888 321 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 CDX1P47902 265 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-215ENST00000515516 KIR2DS1Q14954 304 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 LIN54Q6MZP7 749 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 FAM71F2Q6NXP2 309 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 TMEM91Q6ZNR0 172 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 ODF3L1Q8IXM7 274 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 CYYR1Q96J86 154 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 KCTD7Q96MP8 289 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 P2RX4Q99571 388 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 MGLLQ99685 303 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 LPAR5Q9H1C0 372 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 GHITMQ9H3K2 345 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 SLC23A1Q9UHI7 598 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 AK3Q9UIJ7 227 aa10.73□□□□□ -0.69
TCOF1-215ENST00000515516 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 TRBV6-6A0A0A6YYG2 114 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 NBR2O15453 112 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 ZBTB25P24278 435 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 CEACAM6P40199 344 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 MAP2K4P45985 399 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms