RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 TTRP02766 147 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 LYNP07948 512 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 CGB3P0DN86 165 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 CGB7P0DN87 165 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 ERP29P30040 261 aaKnown RBP3.57□□□□□ -1.84
HTT-211ENST00000513326 SSTR5P35346 364 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 SOX6P35712 828 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 GLP1RP43220 463 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 PRRX1P54821 245 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 MAGOHP61326 146 aaKnown RBP3.57□□□□□ -1.84
HTT-211ENST00000513326 LIPEQ05469 1076 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 RIPPLY1Q0D2K3 151 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 IL24Q13007 206 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 MADCAM1Q13477 382 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 ATXN7L3Q14CW9 347 aaPredicted RBP3.57□□□□□ -1.84
HTT-211ENST00000513326 UBE2V2Q15819 145 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 ECSCRQ19T08 205 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 CLVS2Q5SYC1 327 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 LGALS9CQ6DKI2 356 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 OR52W1Q6IF63 320 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 RBPMS2Q6ZRY4 209 aaKnown RBP3.57□□□□□ -1.84
HTT-211ENST00000513326 CYP4Z1Q86W10 505 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 GBGT1Q8N5D6 347 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 BBS1Q8NFJ9 593 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 OTOSQ8NHW6 89 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 RFESDQ8TAC1 157 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 CORO2AQ92828 525 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 MS4A10Q96PG2 267 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 BTBD10Q9BSF8 475 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 PKIBQ9C010 78 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 CSTL1Q9H114 145 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 GAL3ST2Q9H3Q3 398 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 PARP11Q9NR21 331 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 DNAJB9Q9UBS3 223 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 ENPP5Q9UJA9 477 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 STUB1Q9UNE7 303 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 COPS3Q9UNS2 423 aa3.57□□□□□ -1.84
HTT-211ENST00000513326 V9GYY5 206 aaPredicted RBP3.57□□□□□ -1.84
HTT-211ENST00000513326 IGHV7-81A0A0B4J1V7 117 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 TRAV41A0A0B4J266 112 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 KBTBD11-OT1A0A1B0GTJ5 212 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 TMEM269A0A1B0GVZ9 245 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 MSGN1A6NI15 193 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 SLC33A1O00400 549 aaPredicted RBP3.56□□□□□ -1.84
HTT-211ENST00000513326 RTL8CO15255 209 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 MPZL2O60487 215 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 DHRS3O75911 302 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 APOC1P02654 83 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 SEMG1P04279 462 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 CSN3P07498 182 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 PRKACAP17612 351 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 VHLP40337 213 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 KIR3DL2P43630 455 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 NUDT2P50583 147 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 RAB7AP51149 207 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 ZNF816Q0VGE8 651 aaPredicted RBP3.56□□□□□ -1.84
HTT-211ENST00000513326 PPP1R8Q12972 351 aaKnown RBP3.56□□□□□ -1.84
HTT-211ENST00000513326 TSPAN31Q12999 210 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 PLA2G7Q13093 441 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 LRRC36Q1X8D7 754 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 KRBOX4Q5JUW0 171 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 Q6P435 159 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 OR8H3Q8N146 312 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 ZBTB8BQ8NAP8 495 aaPredicted RBP3.56□□□□□ -1.84
HTT-211ENST00000513326 MINDY2Q8NBR6 621 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 OR4D6Q8NGJ1 314 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 OR2T10Q8NGZ9 312 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 MRGPRDQ8TDS7 321 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.56□□□□□ -1.84
HTT-211ENST00000513326 TMEM106AQ96A25 262 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 FAM162AQ96A26 154 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 RFT1Q96AA3 541 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 CREB3L1Q96BA8 519 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 TLCD1Q96CP7 247 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 RCN3Q96D15 328 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 CYYR1Q96J86 154 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 SH3GL1Q99961 368 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 RASL11BQ9BPW5 248 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 TSSK6Q9BXA6 273 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 OSBPL10Q9BXB5 764 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 GON7Q9BXV9 100 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 OR51V1Q9H2C8 321 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 SLA2Q9H6Q3 261 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 SRD5A3Q9H8P0 318 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 DCAF13Q9NV06 445 aaKnown RBP3.56□□□□□ -1.84
HTT-211ENST00000513326 INTS9Q9NV88 658 aaKnown RBP3.56□□□□□ -1.84
HTT-211ENST00000513326 TAS2R3Q9NYW6 316 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 CALYQ9NYX4 217 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 KIF25Q9UIL4 384 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 ZNF580Q9UK33 172 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.56□□□□□ -1.84
HTT-211ENST00000513326 GSTK1Q9Y2Q3 226 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 AMMECR1Q9Y4X0 333 aaPredicted RBP3.56□□□□□ -1.84
HTT-211ENST00000513326 V9GYS6 101 aa3.56□□□□□ -1.84
HTT-211ENST00000513326 IGHV3-43A0A0B4J1X8 118 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 A0A0B4J293 547 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 IGKV1-9A0A0C4DH69 117 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 TRBV2A0A0J9YWF9 115 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 A0A1W2PN81 502 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms