RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 FNDC4Q9H6D8 234 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 TRBV9A0A0B4J1U6 114 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 CDX4O14627 284 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 PRSS23O95084 383 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 APOMO95445 188 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 TNFRSF1AP19438 455 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 OPRK1P41145 380 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 LPAR6P43657 344 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 RAE1P78406 368 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 SERF2P84101 59 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 KISS1Q15726 138 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 PP6455Q8WZ26 134 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 LSM10Q969L4 123 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 NEU1Q99519 415 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 MEF2BQ02080 365 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 ZNF79Q15937 498 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 MRGPREQ86SM8 312 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 ALKBH3Q96Q83 286 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 OR8B2Q96RD0 313 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 P2RX4Q99571 388 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 WNT10AQ9GZT5 417 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 OCIAD1Q9NX40 245 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 CDC42EP2O14613 210 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 IGLV3-27P01718 113 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 LINC00869P0C866 280 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 KLK2P20151 261 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 CCL7P80098 99 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 FZD5Q13467 585 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 CIRBPQ14011 172 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 OR11G2Q8NGC1 345 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 OR4C13Q8NGP0 309 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 RBKSQ9H477 322 aa7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 ERRFI1Q9UJM3 462 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-218ENST00000513024 A0A0A6YYD5 115 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 A0A0B4J2E0 115 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 A0A1B0GX12 115 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 A0A1W2PP11 408 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 A0A1W2PR80 420 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 GRIFINA4D1Z8 144 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 S1PR2O95136 353 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 CD3EP07766 207 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 CSRP3P50461 194 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 FOXF1Q12946 379 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 FGF14Q92915 247 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 RAB1CQ92928 201 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 MMP25Q9NPA2 562 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 CA10Q9NS85 328 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 TTC3P53804 2025 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 RBP4P02753 201 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 FTH1P19P0C7X4 201 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 MC5RP33032 325 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 SMRP1Q8NCR6 262 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 ANXA10Q9UJ72 324 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 PCM1Q15154 2024 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 PCNTO95613 3336 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 SHISA8B8ZZ34 492 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 LANCL1O43813 399 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 LYZL6O75951 148 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 PEX11BO96011 259 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 RCC1P18754 421 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 GALNSP34059 522 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 SPATA46Q5T0L3 261 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 ZNF683Q8IZ20 524 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 MORN4Q8NDC4 146 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 PTX4Q96A99 478 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 C2orf88Q9BSF0 95 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 LINC00470Q9BZP3 86 aa7.65□□□□□ -1.18
LIMCH1-218ENST00000513024 CACNA1DQ01668 2161 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 CAPZBP47756 277 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 TSPO2Q5TGU0 170 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 HSD17B10Q99714 261 aaKnown RBP7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 TRGV5A0A0B4J1U4 118 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 PPIAL4DF5H284 164 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 H0YIG0 161 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 EPPINO95925 133 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 CA6P23280 308 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 TFPI2P48307 235 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 FUT6P51993 359 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 KLF9Q13886 244 aaPredicted RBP7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 TMEM196Q5HYL7 178 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 ZNF793Q6ZN11 406 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 LIMS2Q7Z4I7 341 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 MOGAT3Q86VF5 341 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 OR10D3Q8NH80 312 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 FLYWCH2Q96CP2 140 aaKnown RBP7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 GDF15Q99988 308 aa7.65□□□□□ -1.19
LIMCH1-218ENST00000513024 C7orf71A4D174 169 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 CCL21O00585 134 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 KLF4O43474 513 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 IGFBP7Q16270 282 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 CARHSP1Q9Y2V2 147 aaKnown RBP7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 C5orf67F2Z3F1 127 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 GDF9O60383 454 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 AMY1AP04745 511 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 SP9P0CG40 484 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 VMA21Q3ZAQ7 101 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 SPINK9Q5DT21 86 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 IBA57Q5T440 356 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms