RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PDP1Q9P0J1 537 aaPredicted RBP2.95□□□□□ -1.94
HTT-210ENST00000512909 MYEF2Q9P2K5 600 aaKnown RBP2.95□□□□□ -1.94
HTT-210ENST00000512909 CD300AQ9UGN4 299 aa2.95□□□□□ -1.94
HTT-210ENST00000512909 HIVEP3Q5T1R4 2406 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 PRRC2AP48634 2157 aaKnown RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 PTPN13Q12923 2485 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 A0A1B0GVY2 172 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 RIIAD1A6NNX1 92 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 CENPBD1B2RD01 187 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 LOC110117498-PIK3R3F6TDL0 507 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 ZNF593O00488 134 aaPredicted RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 AGPAT2O15120 278 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 SOX14O95416 240 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 IFNGP01579 166 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 GYPBP06028 91 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 MMP7P09237 267 aaPredicted RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 CTLA4P16410 223 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 MGMTP16455 207 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 HSD11B1P28845 292 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 CRYBB2P43320 205 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 VDAC2P45880 294 aaPredicted RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 OMPP47874 163 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 EVX1P49640 407 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 LCN2P80188 198 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 TSPAN31Q12999 210 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 PSG7Q13046 419 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 DGCR6Q14129 220 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 ENDOGQ14249 297 aaKnown RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 HIST3H3Q16695 136 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 KLHL12Q53G59 568 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 MESTQ5EB52 335 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 C10orf128Q5T292 105 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 OR2T5Q6IEZ7 315 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 OR2T2Q6IF00 324 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 MRPL21Q7Z2W9 205 aaKnown RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 NAA40Q86UY6 237 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 OR6V1Q8N148 313 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 LINC00471Q8N535 108 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 ZNF283Q8N7M2 679 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 LRRC75AQ8NAA5 344 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 DEFB108BQ8NET1 73 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 OR6K6Q8NGW6 343 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 OR2T29Q8NH02 315 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 CLDND2Q8NHS1 167 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 C7orf33Q8WU49 177 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 UFD1Q92890 307 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 YIPF5Q969M3 257 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 SPTSSAQ969W0 71 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 C10orf35Q96D05 121 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 ZNF75AQ96N20 296 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 TBX15Q96SF7 602 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 RASL11BQ9BPW5 248 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 ZNF426Q9BUY5 554 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 CHID1Q9BWS9 393 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 METTL17Q9H7H0 456 aaPredicted RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 YY1AP1Q9H869 796 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 TMEM100Q9NV29 134 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 TAS2R1Q9NYW7 299 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 DNAJC27Q9NZQ0 273 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 SIGLEC7Q9Y286 467 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 PIGLQ9Y2B2 252 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 SAMHD1Q9Y3Z3 626 aaKnown RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 SMG1Q96Q15 3661 aaKnown RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 EXPH5Q8NEV8 1989 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 NUP214P35658 2090 aaPredicted RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 INTS1Q8N201 2190 aaKnown RBP2.94□□□□□ -1.94
HTT-210ENST00000512909 DOPEY1Q5JWR5 2465 aa2.94□□□□□ -1.94
HTT-210ENST00000512909 MED12LQ86YW9 2145 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 CREBBPQ92793 2442 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 LRRK2Q5S007 2527 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR6C6A6NF89 314 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 FAM183AA6NL82 134 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 B4DSR2 109 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 CLDN25C9JDP6 229 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 CIB2O75838 187 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 SNAP29O95721 258 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 IGF2P01344 180 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 IGHV1-46P01743 117 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 IGHMP01871 453 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 HLA-DPB1P04440 258 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 TSPAN19P0C672 248 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 SLC2A1P11166 492 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 ZNF250P15622 560 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 PCMT1P22061 227 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 RPS27P42677 84 aaKnown RBP2.93□□□□□ -1.94
HTT-210ENST00000512909 KIR2DS4P43632 304 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 GSSP48637 474 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 SRP9P49458 86 aaKnown RBP2.93□□□□□ -1.94
HTT-210ENST00000512909 ZNF133P52736 654 aaPredicted RBP2.93□□□□□ -1.94
HTT-210ENST00000512909 HCCSP53701 268 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 ATP1B3P54709 279 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 LSM6P62312 80 aaKnown RBP2.93□□□□□ -1.94
HTT-210ENST00000512909 AQP6Q13520 282 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR5I1Q13606 314 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 FLOT2Q14254 428 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 GINS1Q14691 196 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR8G1Q15617 311 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR8B8Q15620 311 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 C6orf52Q5T4I8 152 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 GPR157Q5UAW9 335 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms