RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 FABP5Q01469 135 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 LSAMPQ13449 338 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 ZNF880Q6PDB4 577 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 IZUMO2Q6UXV1 221 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 OR2W3Q7Z3T1 314 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 SVOPQ8N4V2 548 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 FAM71E2Q8N5Q1 922 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 LINC00482Q8N8I6 264 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 OR6M1Q8NGM8 313 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 KCNG3Q8TAE7 436 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 NEDD4LQ96PU5 975 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 S1PR3Q99500 378 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 HDHD3Q9BSH5 251 aaPredicted RBP9.46□□□□□ -0.9
CDK7-208ENST00000512687 ABHD14AQ9BUJ0 271 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 MRPL20Q9BYC9 149 aaKnown RBP9.46□□□□□ -0.9
CDK7-208ENST00000512687 CCDC90BQ9GZT6 254 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 RAB9BQ9NP90 201 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 ISYNA1Q9NPH2 558 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 LIN7CQ9NUP9 197 aaKnown RBP9.46□□□□□ -0.9
CDK7-208ENST00000512687 KCNIP1Q9NZI2 227 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 JPT1Q9UK76 154 aa9.46□□□□□ -0.9
CDK7-208ENST00000512687 AK6Q9Y3D8 172 aaKnown RBP9.46□□□□□ -0.9
CDK7-208ENST00000512687 ERICH4A6NGS2 130 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 FOXI3A8MTJ6 420 aaPredicted RBP9.45□□□□□ -0.9
CDK7-208ENST00000512687 SLC17A2O00624 439 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 TXNL1O43396 289 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 NAPSAO96009 420 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 CNTFRP26992 372 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 BLVRBP30043 206 aaPredicted RBP9.45□□□□□ -0.9
CDK7-208ENST00000512687 OR3A3P47888 321 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 HTD2P86397 168 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 MLLT11Q13015 90 aaPredicted RBP9.45□□□□□ -0.9
CDK7-208ENST00000512687 PLA2G7Q13093 441 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 LCNL1Q6ZST4 164 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 C8orf86Q6ZUL3 223 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 PRSS48Q7RTY5 328 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 ZNF554Q86TJ5 538 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 RITA1Q96K30 269 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 CNBD2Q96M20 576 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 PARP12Q9H0J9 701 aaKnown RBP9.45□□□□□ -0.9
CDK7-208ENST00000512687 IFI27L2Q9H2X8 130 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 NECAP2Q9NVZ3 263 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 AK3Q9UIJ7 227 aa9.45□□□□□ -0.9
CDK7-208ENST00000512687 SAA2-SAA4A0A096LPE2 208 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 SHISA3A0PJX4 238 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 YPEL1O60688 119 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 SAA2P0DJI9 122 aaPredicted RBP9.44□□□□□ -0.9
CDK7-208ENST00000512687 CALRP27797 417 aaKnown RBP9.44□□□□□ -0.9
CDK7-208ENST00000512687 THBS3P49746 956 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 TMEM50BP56557 158 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 CLDN12P56749 244 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 CFHR3Q02985 330 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 SSX1Q16384 188 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 LY6G6FQ5SQ64 297 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 STEAP3Q658P3 488 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 ZNF833PQ6ZTB9 187 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 FOXRED2Q8IWF2 684 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 MRPL41Q8IXM3 137 aaKnown RBP9.44□□□□□ -0.9
CDK7-208ENST00000512687 FAM89BQ8N5H3 189 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 YPEL2Q96QA6 119 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 MGLLQ99685 303 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 NABP2Q9BQ15 211 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 PLGRKTQ9HBL7 147 aa9.44□□□□□ -0.9
CDK7-208ENST00000512687 AP4M1O00189 453 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 EREGO14944 169 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 SLC2A2P11168 524 aaPredicted RBP9.43□□□□□ -0.9
CDK7-208ENST00000512687 ARSBP15848 533 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 KRTAP10-11P60412 298 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 TRAM1Q15629 374 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 TBCEQ15813 527 aaPredicted RBP9.43□□□□□ -0.9
CDK7-208ENST00000512687 RAB11BQ15907 218 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 REC114Q7Z4M0 266 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 OR51D1Q8NGF3 324 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 SETD6Q8TBK2 473 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 IL1F10Q8WWZ1 152 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 GALMQ96C23 342 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 DUX3Q96PT4 197 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 RASL11BQ9BPW5 248 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 ZNF251Q9BRH9 671 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 CHMP1AQ9HD42 196 aaPredicted RBP9.43□□□□□ -0.9
CDK7-208ENST00000512687 PLEKHJ1Q9NW61 149 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 OR1A1Q9P1Q5 309 aa9.43□□□□□ -0.9
CDK7-208ENST00000512687 TRBV6-6A0A0A6YYG2 114 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 NUDT19A8MXV4 375 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 LDLRAD4O15165 306 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 ARL6IP5O75915 188 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 PSMA1P25786 263 aaKnown RBP9.42□□□□□ -0.9
CDK7-208ENST00000512687 HOXD3P31249 432 aaPredicted RBP9.42□□□□□ -0.9
CDK7-208ENST00000512687 VEGFCP49767 419 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 SLC35B1P78383 322 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 HLA-DRB3P79483 266 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 MMDQ15546 238 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 DEFB136Q30KP8 78 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 RPL39P5Q59GN2 51 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 HES5Q5TA89 166 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 MOB1BQ7L9L4 216 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 OR2AK2Q8NG84 335 aa9.42□□□□□ -0.9
CDK7-208ENST00000512687 OR8H1Q8NGG4 311 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms