RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MRPS15P82914 257 aaKnown RBP14.79□□□□□ -0.04
UBE3D-207ENST00000509102 HMGN3Q15651 99 aa14.79□□□□□ -0.04
UBE3D-207ENST00000509102 LY6G6FQ5SQ64 297 aa14.79□□□□□ -0.04
UBE3D-207ENST00000509102 COMMD1Q8N668 190 aa14.79□□□□□ -0.04
UBE3D-207ENST00000509102 OR56B1Q8NGI3 324 aa14.79□□□□□ -0.04
UBE3D-207ENST00000509102 LPAR5Q9H1C0 372 aa14.79□□□□□ -0.04
UBE3D-207ENST00000509102 G3V4G9 280 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 AP4M1O00189 453 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 NAPSAO96009 420 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 IGHG2P01859 326 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 GNMTQ14749 295 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 OR51D1Q8NGF3 324 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 FAM3DQ96BQ1 224 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 C12orf4Q9NQ89 552 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 NDUFB11Q9NX14 153 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 HSF4Q9ULV5 492 aa14.78□□□□□ -0.04
UBE3D-207ENST00000509102 CMYA5Q8N3K9 4069 aa14.77□□□□□ -0.04
UBE3D-207ENST00000509102 SOCS1O15524 211 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 RRP9O43818 475 aaKnown RBP14.77□□□□□ -0.05
UBE3D-207ENST00000509102 VEGFCP49767 419 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 LSAMPQ13449 338 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 TCTEX1D4Q5JR98 221 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 SAMD5Q5TGI4 173 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 ZNF329Q86UD4 541 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 FAM89BQ8N5H3 189 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 Q8N6K4 173 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 S1PR3Q99500 378 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 GFI1Q99684 422 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 ABCG5Q9H222 651 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 PIPOXQ9P0Z9 390 aa14.77□□□□□ -0.05
UBE3D-207ENST00000509102 TRAV1-2A0A0B4J238 106 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 HSPA12AO43301 675 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 DENRO43583 198 aaKnown RBP14.76□□□□□ -0.05
UBE3D-207ENST00000509102 GALP22466 123 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 CLDN12P56749 244 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 C2orf76Q3KRA6 126 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 STPG2Q8N412 459 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 FCGR1BQ92637 280 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 NOL4LQ96MY1 436 aaPredicted RBP14.76□□□□□ -0.05
UBE3D-207ENST00000509102 GHITMQ9H3K2 345 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 AK3Q9UIJ7 227 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 RAB22AQ9UL26 194 aa14.76□□□□□ -0.05
UBE3D-207ENST00000509102 A0A0A6YYD4 124 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 TRBV6-6A0A0A6YYG2 114 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 ZNF736B4DX44 427 aaPredicted RBP14.75□□□□□ -0.05
UBE3D-207ENST00000509102 ZBTB25P24278 435 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 GADD45AP24522 165 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 SLC6A1P30531 599 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 SOX6P35712 828 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 GPR12P47775 334 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 MMDQ15546 238 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 SSX1Q16384 188 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 BEAN1Q3B7T3 259 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 HES5Q5TA89 166 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 FAM71F2Q6NXP2 309 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 ZNF880Q6PDB4 577 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 C10orf99Q6UWK7 81 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 REC114Q7Z4M0 266 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 Q8N9W7 124 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 EDARADDQ8WWZ3 215 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 CMSS1Q9BQ75 279 aaKnown RBP14.75□□□□□ -0.05
UBE3D-207ENST00000509102 YTHDF1Q9BYJ9 559 aaKnown RBP14.75□□□□□ -0.05
UBE3D-207ENST00000509102 ZFP57Q9NU63 452 aa14.75□□□□□ -0.05
UBE3D-207ENST00000509102 TRDV1A0A1B0GX56 115 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 NUDT19A8MXV4 375 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 RAB29O14966 203 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 RAB3BP20337 219 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 PSMB9P28065 219 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 HLA-DRB3P79483 266 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 TEX38Q6PEX7 206 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 CD200R1LQ6Q8B3 271 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 ZNF833PQ6ZTB9 187 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 ARHGAP5-AS1Q96IT6 56 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 ZNF251Q9BRH9 671 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 SLC23A1Q9UHI7 598 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 LINC00527Q9UJ94 153 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 PLXNB1O43157 2135 aa14.74□□□□□ -0.05
UBE3D-207ENST00000509102 SAA2-SAA4A0A096LPE2 208 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 CD3GP09693 182 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 SAA2P0DJI9 122 aaPredicted RBP14.73□□□□□ -0.05
UBE3D-207ENST00000509102 VDAC1P21796 283 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 RPL23AP62750 156 aaKnown RBP14.73□□□□□ -0.05
UBE3D-207ENST00000509102 KPRPQ5T749 579 aaPredicted RBP14.73□□□□□ -0.05
UBE3D-207ENST00000509102 FAM71E2Q8N5Q1 922 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 PHF21AQ96BD5 680 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 RAB3CQ96E17 227 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 CYYR1Q96J86 154 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 NABP2Q9BQ15 211 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 PECRQ9BY49 303 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 MRPL20Q9BYC9 149 aaKnown RBP14.73□□□□□ -0.05
UBE3D-207ENST00000509102 PLSCR3Q9NRY6 295 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 KIAA1456Q9P272 454 aa14.73□□□□□ -0.05
UBE3D-207ENST00000509102 TMEM272A0A1B0GTI8 110 aa14.72□□□□□ -0.05
UBE3D-207ENST00000509102 METTL21EPA6NDL7 271 aa14.72□□□□□ -0.05
UBE3D-207ENST00000509102 IFITM5A6NNB3 132 aa14.72□□□□□ -0.05
UBE3D-207ENST00000509102 ITGB1BP1O14713 200 aa14.72□□□□□ -0.05
UBE3D-207ENST00000509102 ST8SIA5O15466 376 aa14.72□□□□□ -0.05
UBE3D-207ENST00000509102 DUS4LO95620 317 aaKnown RBP14.72□□□□□ -0.05
UBE3D-207ENST00000509102 OR5H8P0DN80 308 aa14.72□□□□□ -0.05
UBE3D-207ENST00000509102 CEACAM6P40199 344 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms