RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 EDARADDQ8WWZ3 215 aa15.83■□□□□ 0.12
SFXN1-209ENST00000508290 ARHGAP5-AS1Q96IT6 56 aa15.83■□□□□ 0.12
SFXN1-209ENST00000508290 EAF1Q96JC9 268 aaPredicted RBP15.83■□□□□ 0.12
SFXN1-209ENST00000508290 KCTD7Q96MP8 289 aa15.83■□□□□ 0.12
SFXN1-209ENST00000508290 CMSS1Q9BQ75 279 aaKnown RBP15.83■□□□□ 0.12
SFXN1-209ENST00000508290 PECRQ9BY49 303 aa15.83■□□□□ 0.12
SFXN1-209ENST00000508290 PIPOXQ9P0Z9 390 aa15.83■□□□□ 0.12
SFXN1-209ENST00000508290 SHISA3A0PJX4 238 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 SERPINE3A8MV23 424 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 SLC31A2O15432 143 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 TMEM127O75204 238 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 OPN1MWP04001 364 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 OPN1MW2P0DN77 364 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 OPN1MW3P0DN78 364 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 ZBTB25P24278 435 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 PPP1CCP36873 323 aaKnown RBP15.82■□□□□ 0.12
SFXN1-209ENST00000508290 OR10A3P58181 314 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 HLA-DRB3P79483 266 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 TIMM50Q3ZCQ8 353 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 Q6ZS46 218 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 CENPVQ7Z7K6 275 aaPredicted RBP15.82■□□□□ 0.12
SFXN1-209ENST00000508290 IL1F10Q8WWZ1 152 aa15.82■□□□□ 0.12
SFXN1-209ENST00000508290 LIN7CQ9NUP9 197 aaKnown RBP15.82■□□□□ 0.12
SFXN1-209ENST00000508290 TRRAPQ9Y4A5 3859 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 TNFAIP8O95379 198 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 DIRAS3O95661 229 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 CD3GP09693 182 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 SERPINB10P48595 397 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 SCAND1P57086 179 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 GNMTQ14749 295 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 KIR2DS1Q14954 304 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 Q8N6K4 173 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 OR5AU1Q8NGC0 362 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 OR4X2Q8NGF9 303 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 OR10R2Q8NGX6 335 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 Q9N2K0 584 aa15.81■□□□□ 0.12
SFXN1-209ENST00000508290 RAB29O14966 203 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 TSPAN15O95858 294 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 HNF4GQ14541 408 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 PLAC9Q5JTB6 97 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 C9orf152Q5JTZ5 239 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 FAM53AQ6NSI3 398 aaPredicted RBP15.8■□□□□ 0.12
SFXN1-209ENST00000508290 ZNF833PQ6ZTB9 187 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 FOXRED2Q8IWF2 684 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 C11orf44Q8N8P7 122 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 OR4F17Q8NGA8 305 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 CHPT1Q8WUD6 406 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 OR4F4Q96R69 305 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 S1PR3Q99500 378 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 SLC23A1Q9UHI7 598 aa15.8■□□□□ 0.12
SFXN1-209ENST00000508290 A0A087WXM4 84 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 NCBP2LA6PVI3 153 aaKnown RBP15.79■□□□□ 0.12
SFXN1-209ENST00000508290 TRDCB7Z8K6 153 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 HSPA12AO43301 675 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 KCNAB3O43448 404 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 IGHG2P01859 326 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 CD28P10747 220 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 HIST1H1DP16402 221 aaKnown RBP15.79■□□□□ 0.12
SFXN1-209ENST00000508290 LSAMPQ13449 338 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 TMEM95Q3KNT9 176 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 FBLN7Q53RD9 439 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 OR4A4PQ8NGN8 299 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 GON7Q9BXV9 100 aa15.79■□□□□ 0.12
SFXN1-209ENST00000508290 TET2Q6N021 2002 aaPredicted RBP15.78■□□□□ 0.12
SFXN1-209ENST00000508290 IGHV3-72A0A0B4J1Y9 119 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 RAB27BO00194 218 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 MFNGO00587 321 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 CD36P16671 472 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 CD83Q01151 205 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 NEDD8Q15843 81 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 SRSF7Q16629 238 aaKnown RBP eCLIP15.78■□□□□ 0.12
SFXN1-209ENST00000508290 Q6ZPA2 131 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 SLC35E3Q7Z769 313 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 ODF3L1Q8IXM7 274 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 COMMD1Q8N668 190 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 ABCG5Q9H222 651 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 IFI27L2Q9H2X8 130 aa15.78■□□□□ 0.12
SFXN1-209ENST00000508290 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.78■□□□□ 0.12
SFXN1-209ENST00000508290 SAA2-SAA4A0A096LPE2 208 aa15.77■□□□□ 0.12
SFXN1-209ENST00000508290 SAA2P0DJI9 122 aaPredicted RBP15.77■□□□□ 0.12
SFXN1-209ENST00000508290 SLC35B1P78383 322 aa15.77■□□□□ 0.12
SFXN1-209ENST00000508290 SFXN4Q6P4A7 337 aa15.77■□□□□ 0.12
SFXN1-209ENST00000508290 NR2C2APQ86WQ0 139 aa15.77■□□□□ 0.12
SFXN1-209ENST00000508290 CYYR1Q96J86 154 aa15.77■□□□□ 0.12
SFXN1-209ENST00000508290 CITED2Q99967 270 aaPredicted RBP15.77■□□□□ 0.12
SFXN1-209ENST00000508290 RASL11BQ9BPW5 248 aa15.77■□□□□ 0.12
SFXN1-209ENST00000508290 CHCHD6Q9BRQ6 235 aa15.77■□□□□ 0.12
SFXN1-209ENST00000508290 HDHD3Q9BSH5 251 aaPredicted RBP15.77■□□□□ 0.12
SFXN1-209ENST00000508290 OR51E2Q9H255 320 aa15.77■□□□□ 0.12
SFXN1-209ENST00000508290 TSSC4Q9Y5U2 329 aaPredicted RBP15.77■□□□□ 0.12
SFXN1-209ENST00000508290 PSMB11A5LHX3 300 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 AP4M1O00189 453 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 MC5RP33032 325 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 TALDO1P37837 337 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 CEACAM6P40199 344 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 Q6ZS49 121 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 CROCCP3Q8IVE0 287 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 Q8N9W7 124 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 TSPAN14Q8NG11 270 aa15.76■□□□□ 0.11
SFXN1-209ENST00000508290 FAM110DQ8TAY7 271 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms