RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 MOSP00540 346 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 OPN1MWP04001 364 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 OPN1MW2P0DN77 364 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 OPN1MW3P0DN78 364 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 RAB3BP20337 219 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 MRPS15P82914 257 aaKnown RBP12.37□□□□□ -0.43
CLDND1-211ENST00000506575 C22orf42Q6IC83 251 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 ZNF880Q6PDB4 577 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 ARHGAP5-AS1Q96IT6 56 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 C12orf4Q9NQ89 552 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 RAB22AQ9UL26 194 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 MGAT4AQ9UM21 535 aa12.37□□□□□ -0.43
CLDND1-211ENST00000506575 TRBV6-6A0A0A6YYG2 114 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 TMEM272A0A1B0GTI8 110 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 A0A1W2PRX2 142 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 TCRBV4S1A1TA0A5B7 111 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 IFITM5A6NNB3 132 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 SERPINE3A8MV23 424 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 OR10A3P58181 314 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 CD83Q01151 205 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 LY6G6FQ5SQ64 297 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 CMSS1Q9BQ75 279 aaKnown RBP12.36□□□□□ -0.43
CLDND1-211ENST00000506575 HDHD3Q9BSH5 251 aaPredicted RBP12.36□□□□□ -0.43
CLDND1-211ENST00000506575 PECRQ9BY49 303 aa12.36□□□□□ -0.43
CLDND1-211ENST00000506575 RRP15Q9Y3B9 282 aaKnown RBP12.36□□□□□ -0.43
CLDND1-211ENST00000506575 TSSC4Q9Y5U2 329 aaPredicted RBP12.36□□□□□ -0.43
CLDND1-211ENST00000506575 PSMB11A5LHX3 300 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 FOXI3A8MTJ6 420 aaPredicted RBP12.35□□□□□ -0.43
CLDND1-211ENST00000506575 TMEM50BP56557 158 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 KHDC1LQ5JSQ8 128 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 ZNF773Q6PK81 442 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 SLC35E3Q7Z769 313 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 FOXRED2Q8IWF2 684 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 Q8N6K4 173 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 OR8H1Q8NGG4 311 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 CHPT1Q8WUD6 406 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 RASL11BQ9BPW5 248 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 LIN7CQ9NUP9 197 aaKnown RBP12.35□□□□□ -0.43
CLDND1-211ENST00000506575 STUB1Q9UNE7 303 aa12.35□□□□□ -0.43
CLDND1-211ENST00000506575 PLXNB1O43157 2135 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 SHISA3A0PJX4 238 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 ADARB2-AS1A8MUL3 147 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
CLDND1-211ENST00000506575 LDLRAD4O15165 306 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 HSPA12AO43301 675 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 WIPF1O43516 503 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 IGHG2P01859 326 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 PF4V1P10720 104 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 GADD45AP24522 165 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 SLC35B1P78383 322 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 HLA-DRB3P79483 266 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 LSAMPQ13449 338 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 Q6ZPA2 131 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 TXNL4BQ9NX01 149 aaKnown RBP12.34□□□□□ -0.43
CLDND1-211ENST00000506575 SLC23A1Q9UHI7 598 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 SSR3Q9UNL2 185 aa12.34□□□□□ -0.43
CLDND1-211ENST00000506575 NOTCH3Q9UM47 2321 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 METTL21EPA6NDL7 271 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 KCNAB3O43448 404 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 CD3GP09693 182 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
CLDND1-211ENST00000506575 RAB6AP20340 208 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 ZBTB25P24278 435 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 FGF9P31371 208 aaPredicted RBP12.33□□□□□ -0.44
CLDND1-211ENST00000506575 OR3A3P47888 321 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 PLA2G7Q13093 441 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 TCTEX1D4Q5JR98 221 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 PLAC9Q5JTB6 97 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 C10orf99Q6UWK7 81 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 C1QL4Q86Z23 238 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 ODF3L1Q8IXM7 274 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 Q8N9W7 124 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 NOL4LQ96MY1 436 aaPredicted RBP12.33□□□□□ -0.44
CLDND1-211ENST00000506575 S1PR3Q99500 378 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 MRPL20Q9BYC9 149 aaKnown RBP12.33□□□□□ -0.44
CLDND1-211ENST00000506575 ABCG5Q9H222 651 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 Q9N2K0 584 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 PIPOXQ9P0Z9 390 aa12.33□□□□□ -0.44
CLDND1-211ENST00000506575 A0A075B6Q4 140 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 SMIM30A4D0T7 59 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 RAB29O14966 203 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 CEACAM6P40199 344 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 GPR12P47775 334 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 MMDQ15546 238 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 ZNF833PQ6ZTB9 187 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 ZNF329Q86UD4 541 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 TPRA1Q86W33 373 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 OR10R2Q8NGX6 335 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 EDARADDQ8WWZ3 215 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 NABP2Q9BQ15 211 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 IFI27L2Q9H2X8 130 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 PLSCR3Q9NRY6 295 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 LINC00527Q9UJ94 153 aa12.32□□□□□ -0.44
CLDND1-211ENST00000506575 A0A0B4J203 849 aa12.31□□□□□ -0.44
CLDND1-211ENST00000506575 NOTOA8MTQ0 251 aa12.31□□□□□ -0.44
CLDND1-211ENST00000506575 TRDCB7Z8K6 153 aa12.31□□□□□ -0.44
CLDND1-211ENST00000506575 AP4M1O00189 453 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms