RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 UCHL1P09936 223 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 CD37P11049 281 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 ARSBP15848 533 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 CHATP28329 748 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 PPP1CCP36873 323 aaKnown RBP9.41□□□□□ -0.9
MED28-203ENST00000503945 PSMD7P51665 324 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 TPBGQ13641 420 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 C8orf86Q6ZUL3 223 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 C6orf201Q7Z4U5 140 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 LINC00482Q8N8I6 264 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 KLHL30-AS1Q8NEE0 82 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 OR2AK2Q8NG84 335 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 OR6M1Q8NGM8 313 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 SETD6Q8TBK2 473 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 IL1F10Q8WWZ1 152 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 ZNF251Q9BRH9 671 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 CHCHD6Q9BRQ6 235 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 ABHD14AQ9BUJ0 271 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 VCX3BQ9H321 246 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 PLGRKTQ9HBL7 147 aa9.41□□□□□ -0.9
MED28-203ENST00000503945 ZMAT5Q9UDW3 170 aaKnown RBP9.41□□□□□ -0.9
MED28-203ENST00000503945 LSM2Q9Y333 95 aaKnown RBP9.41□□□□□ -0.9
MED28-203ENST00000503945 SLC22A1O15245 554 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 ARL6IP5O75915 188 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 ELANEP08246 267 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 OR5H8P0DN80 308 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 VDAC1P21796 283 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 PSMA1P25786 263 aaKnown RBP9.4□□□□□ -0.9
MED28-203ENST00000503945 CDX1P47902 265 aaPredicted RBP9.4□□□□□ -0.9
MED28-203ENST00000503945 AQP4P55087 323 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 FOXE3Q13461 319 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 IRF3Q14653 427 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 C5orf24Q7Z6I8 188 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 FAM71E2Q8N5Q1 922 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 NRG4Q8WWG1 115 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 TM2D1Q9BX74 207 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 GHITMQ9H3K2 345 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 ISYNA1Q9NPH2 558 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.4□□□□□ -0.9
MED28-203ENST00000503945 PIPOXQ9P0Z9 390 aa9.4□□□□□ -0.9
MED28-203ENST00000503945 TMEM14DPA8MWL7 114 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 CCL24O00175 119 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 RAB29O14966 203 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 IGF1P05019 195 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 RPLP1P05386 114 aaKnown RBP9.39□□□□□ -0.91
MED28-203ENST00000503945 MYF6P23409 242 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 CEACAM6P40199 344 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 ACTBP60709 375 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 QRFPP83859 136 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 LSAMPQ13449 338 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 GNMTQ14749 295 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 KIR2DS1Q14954 304 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 MMDQ15546 238 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 LIN54Q6MZP7 749 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 C11orf87Q6NUJ2 197 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 TMEM65Q6PI78 240 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 TMEM91Q6ZNR0 172 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 LCNL1Q6ZST4 164 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 C18orf65Q6ZTR6 163 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 ODF3L1Q8IXM7 274 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 FAM89BQ8N5H3 189 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 MGLLQ99685 303 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 NICN1Q9BSH3 213 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 ACOT13Q9NPJ3 140 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 ZNF107Q9UII5 783 aaPredicted RBP9.39□□□□□ -0.91
MED28-203ENST00000503945 MGAT4AQ9UM21 535 aa9.39□□□□□ -0.91
MED28-203ENST00000503945 AK6Q9Y3D8 172 aaKnown RBP9.39□□□□□ -0.91
MED28-203ENST00000503945 WI2-2373I1.2A0A1W2PRP0 233 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 SLC17A2O00624 439 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 NAPSAO96009 420 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 SLC2A2P11168 524 aaPredicted RBP9.38□□□□□ -0.91
MED28-203ENST00000503945 CPEP16870 476 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 ZBTB25P24278 435 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 CRHBPP24387 322 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 HOXD3P31249 432 aaPredicted RBP9.38□□□□□ -0.91
MED28-203ENST00000503945 MC5RP33032 325 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 OR3A3P47888 321 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 RAB25P57735 213 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 KRTAP10-11P60412 298 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 MLLT11Q13015 90 aaPredicted RBP9.38□□□□□ -0.91
MED28-203ENST00000503945 UNC119Q13432 240 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 P2RY14Q15391 338 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 HMGN3Q15651 99 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 RAB11BQ15907 218 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 C2orf76Q3KRA6 126 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 ZNF833PQ6ZTB9 187 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 PRSS48Q7RTY5 328 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 OR8U1Q8NH10 309 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 RITA1Q96K30 269 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 P2RX4Q99571 388 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 NABP2Q9BQ15 211 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 HSPB9Q9BQS6 159 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 ANKRD60Q9BZ19 345 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 KIAA1456Q9P272 454 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 SLC23A1Q9UHI7 598 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 HSF4Q9ULV5 492 aa9.38□□□□□ -0.91
MED28-203ENST00000503945 NBR2O15453 112 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 SOCS1O15524 211 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 HSPA12AO43301 675 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms