RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SLC35A2P78381 396 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 BSPH1Q075Z2 132 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 TBC1D28Q2M2D7 210 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 HLA-DRB5Q30154 266 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 FUNDC1Q8IVP5 155 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 OR4K13Q8NH42 304 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 OR2V1Q8NHB1 315 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 CYGBQ8WWM9 190 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 ABHD14BQ96IU4 210 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 OR7D2Q96RA2 312 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 LRRC19Q9H756 370 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 DNAJC12Q9UKB3 198 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 PSMD13Q9UNM6 376 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 TP53TG1Q9Y2A0 90 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 HIVEP2P31629 2446 aa1.87□□□□□ -2.11
SMC4-225ENST00000497203 C1orf232A0A0U1RR37 186 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 IGSF23A1L1A6 192 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 METTL15A6NJ78 407 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 J3QRE1 110 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 HPGDSO60760 199 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 CRTAPO75718 401 aaPredicted RBP1.86□□□□□ -2.11
SMC4-225ENST00000497203 CRYBA1P05813 215 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 IGHV3-30-3P0DP02 117 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 GRPRP30550 384 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 FUSP35637 526 aaKnown RBP eCLIP1.86□□□□□ -2.11
SMC4-225ENST00000497203 PPP1CCP36873 323 aaKnown RBP1.86□□□□□ -2.11
SMC4-225ENST00000497203 OR1E2P47887 323 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 TPM4P67936 248 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 PDGFRLQ15198 375 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 LRRC26Q2I0M4 334 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 DNM1P34Q6PK57 102 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 ZNF322Q6U7Q0 402 aaPredicted RBP1.86□□□□□ -2.11
SMC4-225ENST00000497203 DRAM2Q6UX65 266 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 SDIM1Q6ZPB5 146 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 CD302Q8IX05 232 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 MSRB3Q8IXL7 192 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 DNAAF3Q8N9W5 541 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 TMEM75Q8N9X5 138 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 SUN5Q8TC36 379 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 PHOSPHO2Q8TCD6 241 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 TLCD1Q96CP7 247 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 C20orf166-AS1Q96NR2 134 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 C1QTNF6Q9BXI9 259 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 UPF3BQ9BZI7 483 aaKnown RBP1.86□□□□□ -2.11
SMC4-225ENST00000497203 PARVAQ9NVD7 372 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 ZNHIT6Q9NWK9 470 aaKnown RBP1.86□□□□□ -2.11
SMC4-225ENST00000497203 TAS2R9Q9NYW1 312 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 OR51B4Q9Y5P0 310 aa1.86□□□□□ -2.11
SMC4-225ENST00000497203 BRD4O60885 1362 aaPredicted RBP1.85□□□□□ -2.11
SMC4-225ENST00000497203 MYO9BQ13459 2157 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 RIMS2Q9UQ26 1411 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 LOC102725191A0A1B0GVB3 256 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 LINC00862A6NCI5 91 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 ATP8B1O43520 1251 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 CRYGDP07320 174 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 LINC00614P0C842 121 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 CBR1P16152 277 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 CDK2P24941 298 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 ATP6V0CP27449 155 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 OPRM1P35372 400 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 CD79BP40259 229 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 ACTBP60709 375 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 ACTG1P63261 375 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 DEFA6Q01524 100 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 MED21Q13503 144 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 C4orf26Q17RF5 130 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 ACSBG2Q5FVE4 666 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 Q6ZRU5 148 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 PPCDCQ96CD2 204 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 ACY3Q96HD9 319 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 SLC22A4Q9H015 551 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 MED28Q9H204 178 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 TUBA4BQ9H853 241 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 IMP3Q9NV31 184 aaKnown RBP1.85□□□□□ -2.11
SMC4-225ENST00000497203 FAM206AQ9NX38 181 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 MRPS16Q9Y3D3 137 aaKnown RBP1.85□□□□□ -2.11
SMC4-225ENST00000497203 HSPE1-MOB4S4R3N1 261 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 DSCAML1Q8TD84 2053 aa1.85□□□□□ -2.11
SMC4-225ENST00000497203 NPATQ14207 1427 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 A0A0A6YYH2 397 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 SDHAF1A6NFY7 115 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 A6NJ64 397 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 C17orf98A8MV24 154 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 ZNF878C9JN71 531 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 DEDDO75618 318 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 IGLV3-27P01718 113 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 OR13C7P0DN81 318 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 RPL14P50914 215 aaKnown RBP1.84□□□□□ -2.11
SMC4-225ENST00000497203 PSG4Q00888 419 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 SMAGPQ0VAQ4 97 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 SPATA31B1PQ5VZV4 182 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 CCDC112Q8NEF3 446 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 PACRGQ96M98 296 aaPredicted RBP1.84□□□□□ -2.11
SMC4-225ENST00000497203 MND1Q9BWT6 205 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 MROQ9BYG7 248 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 OR51B6Q9H340 312 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 SMDT1Q9H4I9 107 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 HEY1Q9Y5J3 304 aa1.84□□□□□ -2.11
SMC4-225ENST00000497203 PTPRJQ12913 1337 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms