RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 G3V318 75 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 I3L521 148 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 ATP6V0E1O15342 81 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 NBR2O15453 112 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 YPEL1O60688 119 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 RGS11O94810 467 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 IGLV1-40P01703 118 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 CD1AP06126 327 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 PPP1CCP36873 323 aaKnown RBP18.08■□□□□ 0.48
COL27A1-208ENST00000494780 ZNF616Q08AN1 781 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 RITA1Q96K30 269 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 YPEL2Q96QA6 119 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 GNB4Q9HAV0 340 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 PARP11Q9NR21 331 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 LRRC42Q9Y546 428 aa18.08■□□□□ 0.48
COL27A1-208ENST00000494780 IGHV7-81A0A0B4J1V7 117 aa18.07■□□□□ 0.48
COL27A1-208ENST00000494780 EFCAB10A6NFE3 127 aa18.07■□□□□ 0.48
COL27A1-208ENST00000494780 C5orf64Q2M2E5 130 aa18.07■□□□□ 0.48
COL27A1-208ENST00000494780 ZNF833PQ6ZTB9 187 aa18.07■□□□□ 0.48
COL27A1-208ENST00000494780 NPBQ8NG41 125 aa18.07■□□□□ 0.48
COL27A1-208ENST00000494780 GALMQ96C23 342 aa18.07■□□□□ 0.48
COL27A1-208ENST00000494780 CST11Q9H112 138 aa18.07■□□□□ 0.48
COL27A1-208ENST00000494780 TRAV41A0A0B4J266 112 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 CNTFRP26992 372 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 MAPK3P27361 379 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-208ENST00000494780 CHATP28329 748 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 C6orf141Q5SZD1 244 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 ASPHD1Q5U4P2 390 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 LIN54Q6MZP7 749 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 C5orf24Q7Z6I8 188 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 FAM46BQ96A09 425 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 CYYR1Q96J86 154 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 ANKRD60Q9BZ19 345 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 C8orf4Q9NR00 106 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 CNOT2Q9NZN8 540 aaKnown RBP18.06■□□□□ 0.48
COL27A1-208ENST00000494780 RYR3Q15413 4870 aa18.06■□□□□ 0.48
COL27A1-208ENST00000494780 CELP19835 753 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 BLVRBP30043 206 aaPredicted RBP18.05■□□□□ 0.48
COL27A1-208ENST00000494780 RAB9AP51151 201 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 GNB1P62873 340 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 DHRSXQ8N5I4 330 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 MINDY2Q8NBR6 621 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 OR2AK2Q8NG84 335 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 NEDD4LQ96PU5 975 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 ASCL2Q99929 193 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 KIAA1456Q9P272 454 aa18.05■□□□□ 0.48
COL27A1-208ENST00000494780 SAA2-SAA4A0A096LPE2 208 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 MYL12BO14950 172 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 NDUFA3O95167 84 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 UBBP0CG47 229 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 SAA2P0DJI9 122 aaPredicted RBP18.04■□□□□ 0.48
COL27A1-208ENST00000494780 OR3A3P47888 321 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 WNT4P56705 351 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 LRRC36Q1X8D7 754 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 FAM71F2Q6NXP2 309 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 ZNF429Q86V71 674 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 PACRGLQ8N7B6 248 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 OR5B12Q96R08 314 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 ABRACLQ9P1F3 81 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 ERGIC3Q9Y282 383 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 SMAD5-AS1Q9Y6J3 95 aa18.04■□□□□ 0.48
COL27A1-208ENST00000494780 LY86O95711 162 aa18.03■□□□□ 0.48
COL27A1-208ENST00000494780 HMGN3Q15651 99 aa18.03■□□□□ 0.48
COL27A1-208ENST00000494780 SULT4A1Q9BR01 284 aa18.03■□□□□ 0.48
COL27A1-208ENST00000494780 IFI27L2Q9H2X8 130 aa18.03■□□□□ 0.48
COL27A1-208ENST00000494780 STEAP1Q9UHE8 339 aa18.03■□□□□ 0.48
COL27A1-208ENST00000494780 STAB2Q8WWQ8 2551 aa18.03■□□□□ 0.48
COL27A1-208ENST00000494780 C3orf84H3BNL1 204 aa18.02■□□□□ 0.48
COL27A1-208ENST00000494780 FAM27D1Q5T7N8 215 aa18.02■□□□□ 0.48
COL27A1-208ENST00000494780 DCUN1D4Q92564 292 aa18.02■□□□□ 0.48
COL27A1-208ENST00000494780 PIPOXQ9P0Z9 390 aa18.02■□□□□ 0.48
COL27A1-208ENST00000494780 PSORS1C1Q9UIG5 152 aa18.02■□□□□ 0.48
COL27A1-208ENST00000494780 OVOL1O14753 267 aa18.01■□□□□ 0.47
COL27A1-208ENST00000494780 CRIP2P52943 208 aaPredicted RBP18.01■□□□□ 0.47
COL27A1-208ENST00000494780 C19orf54Q5BKX5 351 aa18.01■□□□□ 0.47
COL27A1-208ENST00000494780 ZNF660Q6AZW8 331 aaPredicted RBP18.01■□□□□ 0.47
COL27A1-208ENST00000494780 FAAP24Q9BTP7 215 aa18.01■□□□□ 0.47
COL27A1-208ENST00000494780 ISYNA1Q9NPH2 558 aa18.01■□□□□ 0.47
COL27A1-208ENST00000494780 PLCXD1Q9NUJ7 323 aa18.01■□□□□ 0.47
COL27A1-208ENST00000494780 RPS27AP62979 156 aaKnown RBP18■□□□□ 0.47
COL27A1-208ENST00000494780 NDPQ00604 133 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 ECSCRQ19T08 205 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 GLT8D1Q68CQ7 371 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 LAIR2Q6ISS4 152 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 AHSA2Q719I0 299 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 C6orf201Q7Z4U5 140 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 C8orf59Q8N0T1 100 aaPredicted RBP18■□□□□ 0.47
COL27A1-208ENST00000494780 TCTEX1D1Q8N7M0 179 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 NANOGP1Q8N7R0 232 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 IL1F10Q8WWZ1 152 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 TMEM59Q9BXS4 323 aa18■□□□□ 0.47
COL27A1-208ENST00000494780 SORL1Q92673 2214 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 EBAG9O00559 213 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 RRHO14718 337 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 RAB29O14966 203 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 ST8SIA5O15466 376 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 ACSM3Q53FZ2 586 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 C1orf100Q5SVJ3 147 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 OR10K2Q6IF99 312 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 FAM131AQ6UXB0 335 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms