RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ZNF251Q9BRH9 671 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 OR51J1Q9H342 316 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 SPACA1Q9HBV2 294 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 FBXO7Q9Y3I1 522 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 SMAD5-AS1Q9Y6J3 95 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 CSMD3Q7Z407 3707 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 OVOL1O14753 267 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 NBR2O15453 112 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 SAP30O75446 220 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 BAG2O95816 211 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 CHATP28329 748 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 DMKNQ6E0U4 476 aaPredicted RBP9.8□□□□□ -0.84
SKA1-205ENST00000494518 SIGIRRQ6IA17 410 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 ZNF555Q8NEP9 628 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 MRPL30Q8TCC3 161 aaKnown RBP9.8□□□□□ -0.84
SKA1-205ENST00000494518 ABHD5Q8WTS1 349 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 PGLYRP3Q96LB9 341 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 RCHY1Q96PM5 261 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 S100A14Q9HCY8 104 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 RAB9BQ9NP90 201 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 KCNIP1Q9NZI2 227 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 EXOSC1Q9Y3B2 195 aaKnown RBP9.8□□□□□ -0.84
SKA1-205ENST00000494518 DNAH1Q9P2D7 4330 aa9.8□□□□□ -0.84
SKA1-205ENST00000494518 EPPK1P58107 5090 aaKnown RBP9.8□□□□□ -0.84
SKA1-205ENST00000494518 SAA2-SAA4A0A096LPE2 208 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 TRBV5-7A0A0A0MS05 114 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 A0A1W2PN81 502 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 IGLV1-40P01703 118 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 HLA-DRB1P01911 266 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 SAA2P0DJI9 122 aaPredicted RBP9.79□□□□□ -0.84
SKA1-205ENST00000494518 SPNP16150 400 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 FSTP19883 344 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 CHRNA7P36544 502 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 RAB9AP51151 201 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 DOC2BQ14184 412 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 C5orf64Q2M2E5 130 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 TMEM30BQ3MIR4 351 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 YIF1BQ5BJH7 314 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 FAM27D1Q5T7N8 215 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 TRAT1Q6PIZ9 186 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 GLDNQ6ZMI3 551 aaPredicted RBP9.79□□□□□ -0.84
SKA1-205ENST00000494518 HAPLN4Q86UW8 402 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 GAPTQ8N292 157 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 PQLC1Q8N2U9 271 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 MUC7Q8TAX7 377 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 CYGBQ8WWM9 190 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 DLX4Q92988 240 aaPredicted RBP9.79□□□□□ -0.84
SKA1-205ENST00000494518 MRPS24Q96EL2 167 aaKnown RBP9.79□□□□□ -0.84
SKA1-205ENST00000494518 Q96M66 194 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 RDH12Q96NR8 316 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 ZNF580Q9UK33 172 aa9.79□□□□□ -0.84
SKA1-205ENST00000494518 DIMT1Q9UNQ2 313 aaKnown RBP9.79□□□□□ -0.84
SKA1-205ENST00000494518 IGHV4OR15-8A0A075B7B6 117 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 A0A087WW49 117 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 TRIM64CA6NLI5 447 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 SOX15O60248 233 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 GPX5O75715 221 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 SC5DO75845 299 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 IGHV3-11P01762 117 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 FRMD6-AS1P0C7T7 363 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 SNRPBP14678 240 aaKnown RBP9.78□□□□□ -0.84
SKA1-205ENST00000494518 FUT3P21217 361 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 CAPGP40121 348 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 RUNX1Q01196 453 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 SRSF7Q16629 238 aaKnown RBP eCLIP9.78□□□□□ -0.84
SKA1-205ENST00000494518 LRRC36Q1X8D7 754 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 CASC10Q5T4H9 136 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 OR10K2Q6IF99 312 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 LIN54Q6MZP7 749 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 FAM131AQ6UXB0 335 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 ZNF833PQ6ZTB9 187 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 ZNF429Q86V71 674 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 IL1F10Q8WWZ1 152 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 ARPC1AQ92747 370 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 TMEM80Q96HE8 168 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 DERL3Q96Q80 235 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 KCNK15Q9H427 330 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 FBXL15Q9H469 300 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 MBNL3Q9NUK0 354 aaKnown RBP9.78□□□□□ -0.84
SKA1-205ENST00000494518 CHCHD3Q9NX63 227 aaKnown RBP9.78□□□□□ -0.84
SKA1-205ENST00000494518 SMPD3Q9NY59 655 aaPredicted RBP9.78□□□□□ -0.84
SKA1-205ENST00000494518 KIAA1456Q9P272 454 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 JPT1Q9UK76 154 aa9.78□□□□□ -0.84
SKA1-205ENST00000494518 IRGMA1A4Y4 181 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 FAM90A10PA6NDY2 464 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 PDCD6O75340 191 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 GP9P14770 177 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 INSL3P51460 131 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 PLGLAQ15195 96 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 RPL39P5Q59GN2 51 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 STEAP3Q658P3 488 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 ZNF485Q8NCK3 441 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 OR2AK2Q8NG84 335 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 SETD6Q8TBK2 473 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 CLCC1Q96S66 551 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 SULT4A1Q9BR01 284 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 CHCHD6Q9BRQ6 235 aa9.77□□□□□ -0.85
SKA1-205ENST00000494518 FAM103A1Q9BTL3 118 aaKnown RBP9.77□□□□□ -0.85
SKA1-205ENST00000494518 PARP12Q9H0J9 701 aaKnown RBP9.77□□□□□ -0.85
SKA1-205ENST00000494518 IFI27L2Q9H2X8 130 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms