RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 HERPUD1Q15011 391 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 SLC35G3Q8N808 338 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 SCCPDHQ8NBX0 429 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
VCP-207ENST00000493886 CD300LFQ8TDQ1 290 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 NSG2Q9Y328 171 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 ATP23Q9Y6H3 246 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 ASPMQ8IZT6 3477 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 SVILO95425 2214 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 A0A1W2PPH5 198 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 CBY3A6NI87 242 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 VSTM5A8MXK1 200 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 GAPDHP04406 335 aaKnown RBP11.67□□□□□ -0.54
VCP-207ENST00000493886 ARG1P05089 322 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 OR13C7P0DN81 318 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
VCP-207ENST00000493886 GUK1Q16774 197 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 RNF151Q2KHN1 245 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 SPIN3Q5JUX0 258 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 LIAT1Q6ZQX7 453 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 LRTM2Q8N967 370 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 SLC24A4Q8NFF2 622 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 FAM213BQ8TBF2 198 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 METTL1Q9UBP6 276 aaKnown RBP11.67□□□□□ -0.54
VCP-207ENST00000493886 ZFHX4Q86UP3 3567 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 ZFHX2Q9C0A1 2572 aaPredicted RBP11.67□□□□□ -0.54
VCP-207ENST00000493886 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
VCP-207ENST00000493886 hCG_1809904A0A1W2PP81 198 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 A0A1W2PR64 198 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 A0A1W2PRV1 198 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 C22orf46C9J442 243 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 TMEM238C9JI98 176 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 TSTD3H0UI37 97 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 WDR1O75083 606 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 TNFSF13O75888 250 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 PAX6P26367 422 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 C20orf204Q6ZNR8 217 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 UBAC2Q8NBM4 344 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 KLF14Q8TD94 323 aaPredicted RBP11.67□□□□□ -0.54
VCP-207ENST00000493886 MSI2Q96DH6 328 aaKnown RBP11.67□□□□□ -0.54
VCP-207ENST00000493886 SMCO4Q9NRQ5 59 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 GTF3C1Q12789 2109 aa11.67□□□□□ -0.54
VCP-207ENST00000493886 DEGS1O15121 323 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 SELEP16581 610 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 GNRHRP30968 328 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 MPV17P39210 176 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 CXorf67Q86X51 503 aaPredicted RBP11.66□□□□□ -0.54
VCP-207ENST00000493886 LGI3Q8N145 548 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 ZNF610Q8N9Z0 462 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 C18orf12Q96KH6 178 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 PROCRQ9UNN8 238 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 POLDIP2Q9Y2S7 368 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 TRBV6-6A0A0A6YYG2 114 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 IGKV1-6A0A0C4DH72 117 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 SNCAP37840 140 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 ZNF154Q13106 437 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 Q6P435 159 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 Q8IYB0 196 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 HIST1H2BAQ96A08 127 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 STARD4Q96DR4 205 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 ABHD14AQ9BUJ0 271 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 PLEKHA2Q9HB19 425 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 MPPED1O15442 326 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 ERVK11-1P61568 191 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 Q6ZS92 163 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 SEM1Q6ZVN7 128 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 FAM185AQ8N0U4 392 aa11.66□□□□□ -0.54
VCP-207ENST00000493886 PRR14LQ5THK1 2151 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 C7orf77A4D0Y5 90 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 NKX2-6A6NCS4 301 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 A6NNC1 897 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 ITGB1BP1O14713 200 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 CDIPTO14735 213 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 ST8SIA3O43173 380 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 KLK10O43240 276 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 TUSC2O75896 110 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 CGAP01215 116 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 IGHV3-64DA0A0J9YX35 117 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 C3orf85A0A1B0GTC6 90 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 A0A1W2PPE2 198 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 MBD3L4A6NDZ8 208 aaPredicted RBP11.65□□□□□ -0.54
VCP-207ENST00000493886 MBD3L3A6NE82 208 aaPredicted RBP11.65□□□□□ -0.54
VCP-207ENST00000493886 MBD3L5A6NJ08 208 aaPredicted RBP11.65□□□□□ -0.54
VCP-207ENST00000493886 UMAD1C9J7I0 102 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 H0YL77 283 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 NDUFS8O00217 210 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 TNFSF12O43508 249 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 GPR137BO60478 399 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 CYB5R3P00387 301 aaPredicted RBP11.65□□□□□ -0.54
VCP-207ENST00000493886 HEXAP06865 529 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 CECR9P0C854 216 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 OR2B8PP59922 312 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 ZNF880Q6PDB4 577 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 TMEM217Q8N7C4 229 aa11.65□□□□□ -0.54
VCP-207ENST00000493886 MBD3L2Q8NHZ7 208 aaPredicted RBP11.65□□□□□ -0.54
VCP-207ENST00000493886 ZNF71Q9NQZ8 489 aaPredicted RBP11.65□□□□□ -0.54
VCP-207ENST00000493886 KPTNQ9Y664 436 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms