RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	IGHV2-5	P01817	119 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	MSMB	P08118	114 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	FAM106CP	P0CH98	169 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	IGHV4-31	P0DP07	118 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	MYL9	P24844	172 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	CFP	P27918	469 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	CFHR2	P36980	270 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	PMEL	P40967	661 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	MAP2K4	P45985	399 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	P2RY1	P47900	373 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	PAX5	Q02548	391 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	NEDD8	Q15843	81 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	LRRC37A5P	Q49AS3	106 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	HSD17B12	Q53GQ0	312 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	FAM201A	Q5SY85	155 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	UBE2U	Q5VVX9	321 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	TEX36	Q5VZQ5	186 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	STUM	Q69YW2	141 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	CYB5R2	Q6BCY4	276 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	FAM71F2	Q6NXP2	309 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	BTNL3	Q6UXE8	466 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	SSX9	Q7RTT3	188 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	SLC36A1	Q7Z2H8	476 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	LRRC28	Q86X40	367 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	CALHM1	Q8IU99	346 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	MKX	Q8IYA7	352 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	JAGN1	Q8N5M9	183 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	TEX29	Q8N6K0	151 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	MAPKAPK5-AS1	Q8N8E1	139 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	PRR26	Q8N8Z3	221 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	ZNF565	Q8N9K5	539 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	C19orf18	Q8NEA5	215 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	DEFB108B	Q8NET1	73 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	OR51A2	Q8NGJ7	313 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	OR1L6	Q8NGR2	347 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	ANGPTL6	Q8NI99	470 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	TNFAIP8L1	Q8WVP5	186 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	CEP19	Q96LK0	163 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	NEDD4L	Q96PU5	975 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	DERL3	Q96Q80	235 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	NRIP2	Q9BQI9	281 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	TMEM246	Q9BRR3	403 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	DCTN5	Q9BTE1	182 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	URM1	Q9BTM9	101 aa	Known RBP	3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	FGF23	Q9GZV9	251 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	SHARPIN	Q9H0F6	387 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	HEATR1	Q9H583	2144 aa	Known RBP	3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	METTL17	Q9H7H0	456 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	ZNF696	Q9H7X3	374 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	PATZ1	Q9HBE1	687 aa	Known RBP	3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	RHOF	Q9HBH0	211 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	NDUFB11	Q9NX14	153 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	C11orf21	Q9P2W6	132 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	CLN8	Q9UBY8	286 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	OR2W1	Q9Y3N9	320 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	LRRC42	Q9Y546	428 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	ADGRG4	Q8IZF6	3080 aa		3.57	□□□□□ -1.84
SFPQ-210	ENST00000490668	USF3	Q68DE3	2245 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	ARFGEF3	Q5TH69	2177 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	IGKV1-27	A0A075B6S5	117 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	TRAV8-7	A0A075B6U6	113 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	IGHV3OR15-7	A0A075B7D8	119 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668		A0A087WXM4	84 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668		A0A0G2JMP0	313 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668		A0A0X1KG70	313 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	OR2AT4	A6NND4	320 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	GABRP	O00591	440 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	NDUFB3	O43676	98 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	SYNGR1	O43759	233 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	ENSA	O43768	121 aa	Known RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	ANGPTL7	O43827	346 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	NOS1AP	O75052	506 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	ZNF780A	O75290	641 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	NDUFS6	O75380	124 aa	Known RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	SC5D	O75845	299 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	LY6G6D	O95868	133 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	LHB	P01229	141 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	GYPA	P02724	150 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	MAS1	P04201	325 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	ALDOB	P05062	364 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	SERPINE2	P07093	398 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	PGA5	P0DJD9	388 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	JUNB	P17275	347 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	IL2RG	P31785	369 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	ZNF93	P35789	620 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	RANBP1	P43487	201 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	GABRA2	P47869	451 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	OR3A4P	P47883	348 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	DVL1P1	P54792	670 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	ZP1	P60852	638 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	RPS11	P62280	158 aa	Known RBP eCLIP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	RPS25	P62851	125 aa	Known RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	EMX1	Q04741	257 aa	Predicted RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	HNRNPA0	Q13151	305 aa	Known RBP	3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	TPBG	Q13641	420 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	KISS1	Q15726	138 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	SSX1	Q16384	188 aa		3.56	□□□□□ -1.84
SFPQ-210	ENST00000490668	TIMM50	Q3ZCQ8	353 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms